Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcd2Q99JR8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.61■□□□□ 0.89
Smarcd2Q99JR8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcd2Q99JR8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcd2Q99JR8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcd2Q99JR8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcd2Q99JR8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcd2Q99JR8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcd2Q99JR8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcd2Q99JR8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smarcd2Q99JR8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smarcd2Q99JR8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smarcd2Q99JR8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd2Q99JR8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd2Q99JR8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd2Q99JR8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd2Q99JR8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd2Q99JR8 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.59■□□□□ 0.89
Smarcd2Q99JR8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd2Q99JR8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd2Q99JR8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd2Q99JR8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd2Q99JR8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd2Q99JR8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd2Q99JR8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcd2Q99JR8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcd2Q99JR8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcd2Q99JR8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcd2Q99JR8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.58■□□□□ 0.89
Smarcd2Q99JR8 Gm11421-201ENSMUST00000122124 294 ntBASIC20.58■□□□□ 0.89
Smarcd2Q99JR8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcd2Q99JR8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcd2Q99JR8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Gm18671-201ENSMUST00000214826 683 ntBASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcd2Q99JR8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcd2Q99JR8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcd2Q99JR8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Smarcd2Q99JR8 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.56■□□□□ 0.88
Smarcd2Q99JR8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Smarcd2Q99JR8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcd2Q99JR8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcd2Q99JR8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcd2Q99JR8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.55■□□□□ 0.88
Smarcd2Q99JR8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Smarcd2Q99JR8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Smarcd2Q99JR8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd2Q99JR8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd2Q99JR8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd2Q99JR8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd2Q99JR8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd2Q99JR8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd2Q99JR8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd2Q99JR8 Gm37179-201ENSMUST00000194862 823 ntBASIC20.54■□□□□ 0.88
Smarcd2Q99JR8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd2Q99JR8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd2Q99JR8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd2Q99JR8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd2Q99JR8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd2Q99JR8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd2Q99JR8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd2Q99JR8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd2Q99JR8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.53■□□□□ 0.88
Smarcd2Q99JR8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd2Q99JR8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.53■□□□□ 0.88
Smarcd2Q99JR8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcd2Q99JR8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcd2Q99JR8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Smarcd2Q99JR8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcd2Q99JR8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcd2Q99JR8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcd2Q99JR8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Smarcd2Q99JR8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Smarcd2Q99JR8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Smarcd2Q99JR8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.51■□□□□ 0.87
Smarcd2Q99JR8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.51■□□□□ 0.87
Smarcd2Q99JR8 Mir6236-201ENSMUST00000184437 123 ntBASIC20.51■□□□□ 0.87
Smarcd2Q99JR8 Gm10033-202ENSMUST00000211874 928 ntBASIC20.51■□□□□ 0.87
Smarcd2Q99JR8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcd2Q99JR8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcd2Q99JR8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcd2Q99JR8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.51■□□□□ 0.87
Smarcd2Q99JR8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcd2Q99JR8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd2Q99JR8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd2Q99JR8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd2Q99JR8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Smarcd2Q99JR8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd2Q99JR8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms