Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.22■■□□□ 1.31
Smc1bQ920F6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc1bQ920F6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Smc1bQ920F6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Smc1bQ920F6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc1bQ920F6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC23.21■■□□□ 1.31
Smc1bQ920F6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.21■■□□□ 1.31
Smc1bQ920F6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Smc1bQ920F6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Smc1bQ920F6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Smc1bQ920F6 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.21■■□□□ 1.31
Smc1bQ920F6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc1bQ920F6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Smc1bQ920F6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc1bQ920F6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Smc1bQ920F6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc1bQ920F6 Gm43173-201ENSMUST00000202246 593 ntBASIC23.2■■□□□ 1.3
Smc1bQ920F6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc1bQ920F6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Smc1bQ920F6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Smc1bQ920F6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc1bQ920F6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc1bQ920F6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.19■■□□□ 1.3
Smc1bQ920F6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Smc1bQ920F6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.19■■□□□ 1.3
Smc1bQ920F6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc1bQ920F6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Smc1bQ920F6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc1bQ920F6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc1bQ920F6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Smc1bQ920F6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Smc1bQ920F6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.19■■□□□ 1.3
Smc1bQ920F6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Smc1bQ920F6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc1bQ920F6 Gm27405-201ENSMUST00000184201 112 ntBASIC23.18■■□□□ 1.3
Smc1bQ920F6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Smc1bQ920F6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Smc1bQ920F6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.18■■□□□ 1.3
Smc1bQ920F6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Smc1bQ920F6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.18■■□□□ 1.3
Smc1bQ920F6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Smc1bQ920F6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.17■■□□□ 1.3
Smc1bQ920F6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Smc1bQ920F6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc1bQ920F6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Smc1bQ920F6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
Smc1bQ920F6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Smc1bQ920F6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc1bQ920F6 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.17■■□□□ 1.3
Smc1bQ920F6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc1bQ920F6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Smc1bQ920F6 Gm42569-201ENSMUST00000200539 472 ntBASIC23.15■■□□□ 1.3
Smc1bQ920F6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Smc1bQ920F6 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.14■■□□□ 1.29
Smc1bQ920F6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc1bQ920F6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc1bQ920F6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Smc1bQ920F6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc1bQ920F6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc1bQ920F6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smc1bQ920F6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smc1bQ920F6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.13■■□□□ 1.29
Smc1bQ920F6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Smc1bQ920F6 Gm26571-201ENSMUST00000181399 666 ntBASIC23.13■■□□□ 1.29
Smc1bQ920F6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smc1bQ920F6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.12■■□□□ 1.29
Smc1bQ920F6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Smc1bQ920F6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Smc1bQ920F6 Gm10493-201ENSMUST00000097270 612 ntBASIC23.12■■□□□ 1.29
Smc1bQ920F6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc1bQ920F6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Smc1bQ920F6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc1bQ920F6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc1bQ920F6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc1bQ920F6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc1bQ920F6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Smc1bQ920F6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc1bQ920F6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc1bQ920F6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc1bQ920F6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc1bQ920F6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.11■■□□□ 1.29
Smc1bQ920F6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc1bQ920F6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Smc1bQ920F6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Smc1bQ920F6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.1■■□□□ 1.29
Smc1bQ920F6 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms