Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhac1Q91Y10 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Pcdhac1Q91Y10 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhac1Q91Y10 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhac1Q91Y10 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Pcdhac1Q91Y10 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhac1Q91Y10 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhac1Q91Y10 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.83■□□□□ 0.61
Pcdhac1Q91Y10 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhac1Q91Y10 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.83■□□□□ 0.6
Pcdhac1Q91Y10 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhac1Q91Y10 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhac1Q91Y10 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhac1Q91Y10 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pcdhac1Q91Y10 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhac1Q91Y10 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhac1Q91Y10 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdhac1Q91Y10 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhac1Q91Y10 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhac1Q91Y10 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhac1Q91Y10 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhac1Q91Y10 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhac1Q91Y10 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.82■□□□□ 0.6
Pcdhac1Q91Y10 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhac1Q91Y10 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhac1Q91Y10 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhac1Q91Y10 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Pcdhac1Q91Y10 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhac1Q91Y10 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhac1Q91Y10 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhac1Q91Y10 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhac1Q91Y10 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhac1Q91Y10 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhac1Q91Y10 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhac1Q91Y10 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac1Q91Y10 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.8■□□□□ 0.6
Pcdhac1Q91Y10 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac1Q91Y10 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac1Q91Y10 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac1Q91Y10 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac1Q91Y10 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac1Q91Y10 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhac1Q91Y10 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhac1Q91Y10 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdhac1Q91Y10 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac1Q91Y10 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.78■□□□□ 0.6
Pcdhac1Q91Y10 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhac1Q91Y10 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac1Q91Y10 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac1Q91Y10 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac1Q91Y10 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac1Q91Y10 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac1Q91Y10 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac1Q91Y10 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdhac1Q91Y10 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhac1Q91Y10 Gm10399-202ENSMUST00000202768 748 ntBASIC18.77■□□□□ 0.6
Pcdhac1Q91Y10 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac1Q91Y10 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac1Q91Y10 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhac1Q91Y10 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhac1Q91Y10 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhac1Q91Y10 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhac1Q91Y10 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac1Q91Y10 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac1Q91Y10 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac1Q91Y10 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac1Q91Y10 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.76■□□□□ 0.59
Pcdhac1Q91Y10 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac1Q91Y10 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac1Q91Y10 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac1Q91Y10 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac1Q91Y10 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac1Q91Y10 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhac1Q91Y10 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac1Q91Y10 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac1Q91Y10 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.75■□□□□ 0.59
Pcdhac1Q91Y10 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac1Q91Y10 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac1Q91Y10 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac1Q91Y10 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhac1Q91Y10 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac1Q91Y10 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac1Q91Y10 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac1Q91Y10 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac1Q91Y10 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhac1Q91Y10 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms