Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.85■□□□□ 0.93
Pcdhb6Q91XZ4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb6Q91XZ4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdhb6Q91XZ4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb6Q91XZ4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb6Q91XZ4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Pcdhb6Q91XZ4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb6Q91XZ4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb6Q91XZ4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Pcdhb6Q91XZ4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb6Q91XZ4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb6Q91XZ4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb6Q91XZ4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb6Q91XZ4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb6Q91XZ4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb6Q91XZ4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdhb6Q91XZ4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdhb6Q91XZ4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.84■□□□□ 0.93
Pcdhb6Q91XZ4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb6Q91XZ4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb6Q91XZ4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb6Q91XZ4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb6Q91XZ4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb6Q91XZ4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.83■□□□□ 0.93
Pcdhb6Q91XZ4 Gm43530-201ENSMUST00000195920 274 ntBASIC20.83■□□□□ 0.93
Pcdhb6Q91XZ4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pcdhb6Q91XZ4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
Pcdhb6Q91XZ4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb6Q91XZ4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Pcdhb6Q91XZ4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb6Q91XZ4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb6Q91XZ4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhb6Q91XZ4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.82■□□□□ 0.92
Pcdhb6Q91XZ4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb6Q91XZ4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb6Q91XZ4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb6Q91XZ4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb6Q91XZ4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhb6Q91XZ4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb6Q91XZ4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.81■□□□□ 0.92
Pcdhb6Q91XZ4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb6Q91XZ4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb6Q91XZ4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb6Q91XZ4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb6Q91XZ4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb6Q91XZ4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb6Q91XZ4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb6Q91XZ4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb6Q91XZ4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb6Q91XZ4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb6Q91XZ4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb6Q91XZ4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb6Q91XZ4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb6Q91XZ4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pcdhb6Q91XZ4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pcdhb6Q91XZ4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb6Q91XZ4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb6Q91XZ4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb6Q91XZ4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb6Q91XZ4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.78■□□□□ 0.92
Pcdhb6Q91XZ4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhb6Q91XZ4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb6Q91XZ4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb6Q91XZ4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb6Q91XZ4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb6Q91XZ4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb6Q91XZ4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb6Q91XZ4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb6Q91XZ4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb6Q91XZ4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb6Q91XZ4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb6Q91XZ4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb6Q91XZ4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Pcdhb6Q91XZ4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.77■□□□□ 0.92
Pcdhb6Q91XZ4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb6Q91XZ4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhb6Q91XZ4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb6Q91XZ4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb6Q91XZ4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb6Q91XZ4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb6Q91XZ4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb6Q91XZ4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb6Q91XZ4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb6Q91XZ4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb6Q91XZ4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb6Q91XZ4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb6Q91XZ4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms