Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Trex1Q91XB0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trex1Q91XB0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.37■■□□□ 1.33
Trex1Q91XB0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.37■■□□□ 1.33
Trex1Q91XB0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trex1Q91XB0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.37■■□□□ 1.33
Trex1Q91XB0 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.37■■□□□ 1.33
Trex1Q91XB0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trex1Q91XB0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trex1Q91XB0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trex1Q91XB0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.37■■□□□ 1.33
Trex1Q91XB0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Trex1Q91XB0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.36■■□□□ 1.33
Trex1Q91XB0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trex1Q91XB0 Gm10493-201ENSMUST00000097270 612 ntBASIC23.36■■□□□ 1.33
Trex1Q91XB0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.36■■□□□ 1.33
Trex1Q91XB0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.36■■□□□ 1.33
Trex1Q91XB0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Trex1Q91XB0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trex1Q91XB0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
Trex1Q91XB0 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.35■■□□□ 1.33
Trex1Q91XB0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
Trex1Q91XB0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.35■■□□□ 1.33
Trex1Q91XB0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trex1Q91XB0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trex1Q91XB0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trex1Q91XB0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trex1Q91XB0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.34■■□□□ 1.33
Trex1Q91XB0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.34■■□□□ 1.33
Trex1Q91XB0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trex1Q91XB0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trex1Q91XB0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trex1Q91XB0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trex1Q91XB0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.33■■□□□ 1.33
Trex1Q91XB0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Trex1Q91XB0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trex1Q91XB0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trex1Q91XB0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trex1Q91XB0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trex1Q91XB0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trex1Q91XB0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.32■■□□□ 1.32
Trex1Q91XB0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.32■■□□□ 1.32
Trex1Q91XB0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trex1Q91XB0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.31■■□□□ 1.32
Trex1Q91XB0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trex1Q91XB0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trex1Q91XB0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Trex1Q91XB0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Trex1Q91XB0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trex1Q91XB0 Gm26571-201ENSMUST00000181399 666 ntBASIC23.3■■□□□ 1.32
Trex1Q91XB0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trex1Q91XB0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trex1Q91XB0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trex1Q91XB0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trex1Q91XB0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Trex1Q91XB0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trex1Q91XB0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trex1Q91XB0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trex1Q91XB0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trex1Q91XB0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trex1Q91XB0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trex1Q91XB0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trex1Q91XB0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.29■■□□□ 1.32
Trex1Q91XB0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.29■■□□□ 1.32
Trex1Q91XB0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.29■■□□□ 1.32
Trex1Q91XB0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trex1Q91XB0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trex1Q91XB0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trex1Q91XB0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trex1Q91XB0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trex1Q91XB0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trex1Q91XB0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trex1Q91XB0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trex1Q91XB0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.28■■□□□ 1.32
Trex1Q91XB0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trex1Q91XB0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trex1Q91XB0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Trex1Q91XB0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trex1Q91XB0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trex1Q91XB0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trex1Q91XB0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trex1Q91XB0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trex1Q91XB0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trex1Q91XB0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Trex1Q91XB0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.27■■□□□ 1.32
Trex1Q91XB0 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.27■■□□□ 1.32
Trex1Q91XB0 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.27■■□□□ 1.32
Trex1Q91XB0 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.27■■□□□ 1.32
Trex1Q91XB0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.27■■□□□ 1.32
Trex1Q91XB0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trex1Q91XB0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trex1Q91XB0 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.27■■□□□ 1.32
Trex1Q91XB0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trex1Q91XB0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Trex1Q91XB0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trex1Q91XB0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trex1Q91XB0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trex1Q91XB0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trex1Q91XB0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trex1Q91XB0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms