Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx1Q91V10 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx1Q91V10 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vsx1Q91V10 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Vsx1Q91V10 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vsx1Q91V10 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Vsx1Q91V10 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vsx1Q91V10 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vsx1Q91V10 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.03■□□□□ 0.8
Vsx1Q91V10 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vsx1Q91V10 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vsx1Q91V10 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vsx1Q91V10 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vsx1Q91V10 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vsx1Q91V10 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Vsx1Q91V10 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vsx1Q91V10 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Vsx1Q91V10 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Vsx1Q91V10 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vsx1Q91V10 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vsx1Q91V10 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vsx1Q91V10 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vsx1Q91V10 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vsx1Q91V10 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vsx1Q91V10 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Vsx1Q91V10 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
Vsx1Q91V10 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vsx1Q91V10 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.02■□□□□ 0.79
Vsx1Q91V10 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.01■□□□□ 0.79
Vsx1Q91V10 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vsx1Q91V10 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vsx1Q91V10 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Vsx1Q91V10 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vsx1Q91V10 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vsx1Q91V10 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.01■□□□□ 0.79
Vsx1Q91V10 Smad6-203ENSMUST00000179458 273 ntBASIC20.01■□□□□ 0.79
Vsx1Q91V10 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vsx1Q91V10 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vsx1Q91V10 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vsx1Q91V10 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vsx1Q91V10 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vsx1Q91V10 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vsx1Q91V10 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Vsx1Q91V10 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx1Q91V10 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx1Q91V10 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx1Q91V10 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.99■□□□□ 0.79
Vsx1Q91V10 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx1Q91V10 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.99■□□□□ 0.79
Vsx1Q91V10 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.99■□□□□ 0.79
Vsx1Q91V10 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx1Q91V10 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.99■□□□□ 0.79
Vsx1Q91V10 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.99■□□□□ 0.79
Vsx1Q91V10 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.99■□□□□ 0.79
Vsx1Q91V10 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx1Q91V10 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx1Q91V10 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx1Q91V10 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx1Q91V10 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.98■□□□□ 0.79
Vsx1Q91V10 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.98■□□□□ 0.79
Vsx1Q91V10 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vsx1Q91V10 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.98■□□□□ 0.79
Vsx1Q91V10 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vsx1Q91V10 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Vsx1Q91V10 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vsx1Q91V10 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vsx1Q91V10 Gm10602-201ENSMUST00000098239 609 ntBASIC19.97■□□□□ 0.79
Vsx1Q91V10 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
Vsx1Q91V10 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vsx1Q91V10 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vsx1Q91V10 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vsx1Q91V10 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vsx1Q91V10 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vsx1Q91V10 Gm43530-201ENSMUST00000195920 274 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms