Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H1fooQ8VIK3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H1fooQ8VIK3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
H1fooQ8VIK3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
H1fooQ8VIK3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H1fooQ8VIK3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
H1fooQ8VIK3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
H1fooQ8VIK3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H1fooQ8VIK3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H1fooQ8VIK3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H1fooQ8VIK3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H1fooQ8VIK3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H1fooQ8VIK3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
H1fooQ8VIK3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
H1fooQ8VIK3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H1fooQ8VIK3 Notumos-201ENSMUST00000151998 2659 ntBASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Gm5812-201ENSMUST00000061073 957 ntBASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
H1fooQ8VIK3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
H1fooQ8VIK3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
H1fooQ8VIK3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
H1fooQ8VIK3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
H1fooQ8VIK3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.87■□□□□ 0.29
H1fooQ8VIK3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H1fooQ8VIK3 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.87■□□□□ 0.29
H1fooQ8VIK3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
H1fooQ8VIK3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H1fooQ8VIK3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H1fooQ8VIK3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H1fooQ8VIK3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H1fooQ8VIK3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H1fooQ8VIK3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.86■□□□□ 0.29
H1fooQ8VIK3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H1fooQ8VIK3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H1fooQ8VIK3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H1fooQ8VIK3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.86■□□□□ 0.29
H1fooQ8VIK3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H1fooQ8VIK3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H1fooQ8VIK3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H1fooQ8VIK3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H1fooQ8VIK3 Gm15546-201ENSMUST00000122095 826 ntBASIC16.85■□□□□ 0.29
H1fooQ8VIK3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.85■□□□□ 0.29
H1fooQ8VIK3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.85■□□□□ 0.29
H1fooQ8VIK3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.85■□□□□ 0.29
H1fooQ8VIK3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H1fooQ8VIK3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
H1fooQ8VIK3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.85■□□□□ 0.29
H1fooQ8VIK3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H1fooQ8VIK3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H1fooQ8VIK3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.84■□□□□ 0.29
H1fooQ8VIK3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H1fooQ8VIK3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H1fooQ8VIK3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
H1fooQ8VIK3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H1fooQ8VIK3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H1fooQ8VIK3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.84■□□□□ 0.29
H1fooQ8VIK3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.84■□□□□ 0.29
H1fooQ8VIK3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H1fooQ8VIK3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H1fooQ8VIK3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H1fooQ8VIK3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H1fooQ8VIK3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H1fooQ8VIK3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
H1fooQ8VIK3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H1fooQ8VIK3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H1fooQ8VIK3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H1fooQ8VIK3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H1fooQ8VIK3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.83■□□□□ 0.28
H1fooQ8VIK3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H1fooQ8VIK3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H1fooQ8VIK3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H1fooQ8VIK3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Gm7143-201ENSMUST00000222811 859 ntBASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H1fooQ8VIK3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H1fooQ8VIK3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms