Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TraipQ8VIG6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TraipQ8VIG6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TraipQ8VIG6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TraipQ8VIG6 Gm26833-201ENSMUST00000180899 440 ntBASIC21.63■■□□□ 1.05
TraipQ8VIG6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.63■■□□□ 1.05
TraipQ8VIG6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TraipQ8VIG6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TraipQ8VIG6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TraipQ8VIG6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TraipQ8VIG6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TraipQ8VIG6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TraipQ8VIG6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
TraipQ8VIG6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.62■■□□□ 1.05
TraipQ8VIG6 Smad6-203ENSMUST00000179458 273 ntBASIC21.62■■□□□ 1.05
TraipQ8VIG6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.62■■□□□ 1.05
TraipQ8VIG6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TraipQ8VIG6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.62■■□□□ 1.05
TraipQ8VIG6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TraipQ8VIG6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TraipQ8VIG6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TraipQ8VIG6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TraipQ8VIG6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TraipQ8VIG6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.61■■□□□ 1.05
TraipQ8VIG6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.61■■□□□ 1.05
TraipQ8VIG6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.61■■□□□ 1.05
TraipQ8VIG6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TraipQ8VIG6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TraipQ8VIG6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.6■■□□□ 1.05
TraipQ8VIG6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
TraipQ8VIG6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TraipQ8VIG6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TraipQ8VIG6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TraipQ8VIG6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.59■■□□□ 1.05
TraipQ8VIG6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.59■■□□□ 1.05
TraipQ8VIG6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TraipQ8VIG6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
TraipQ8VIG6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TraipQ8VIG6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.58■■□□□ 1.05
TraipQ8VIG6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TraipQ8VIG6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
TraipQ8VIG6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
TraipQ8VIG6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TraipQ8VIG6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TraipQ8VIG6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TraipQ8VIG6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TraipQ8VIG6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TraipQ8VIG6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.57■■□□□ 1.04
TraipQ8VIG6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.57■■□□□ 1.04
TraipQ8VIG6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TraipQ8VIG6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TraipQ8VIG6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TraipQ8VIG6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TraipQ8VIG6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TraipQ8VIG6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TraipQ8VIG6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TraipQ8VIG6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.56■■□□□ 1.04
TraipQ8VIG6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TraipQ8VIG6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TraipQ8VIG6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TraipQ8VIG6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TraipQ8VIG6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TraipQ8VIG6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.56■■□□□ 1.04
TraipQ8VIG6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TraipQ8VIG6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TraipQ8VIG6 Gm43060-201ENSMUST00000200621 289 ntBASIC21.55■■□□□ 1.04
TraipQ8VIG6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TraipQ8VIG6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TraipQ8VIG6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.55■■□□□ 1.04
TraipQ8VIG6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TraipQ8VIG6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TraipQ8VIG6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TraipQ8VIG6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TraipQ8VIG6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TraipQ8VIG6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TraipQ8VIG6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TraipQ8VIG6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TraipQ8VIG6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
TraipQ8VIG6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.54■■□□□ 1.04
TraipQ8VIG6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TraipQ8VIG6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.53■■□□□ 1.04
TraipQ8VIG6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TraipQ8VIG6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TraipQ8VIG6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.53■■□□□ 1.04
TraipQ8VIG6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TraipQ8VIG6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TraipQ8VIG6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TraipQ8VIG6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms