Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg4Q8VHY0 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.55■□□□□ 0.4
Cspg4Q8VHY0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.55■□□□□ 0.4
Cspg4Q8VHY0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cspg4Q8VHY0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg4Q8VHY0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg4Q8VHY0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg4Q8VHY0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg4Q8VHY0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg4Q8VHY0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg4Q8VHY0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Cspg4Q8VHY0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg4Q8VHY0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cspg4Q8VHY0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg4Q8VHY0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.54■□□□□ 0.4
Cspg4Q8VHY0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cspg4Q8VHY0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cspg4Q8VHY0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg4Q8VHY0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg4Q8VHY0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cspg4Q8VHY0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg4Q8VHY0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg4Q8VHY0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg4Q8VHY0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.53■□□□□ 0.4
Cspg4Q8VHY0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.53■□□□□ 0.4
Cspg4Q8VHY0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg4Q8VHY0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg4Q8VHY0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg4Q8VHY0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg4Q8VHY0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg4Q8VHY0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Cspg4Q8VHY0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cspg4Q8VHY0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cspg4Q8VHY0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cspg4Q8VHY0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Cspg4Q8VHY0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg4Q8VHY0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg4Q8VHY0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg4Q8VHY0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cspg4Q8VHY0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.51■□□□□ 0.39
Cspg4Q8VHY0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg4Q8VHY0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg4Q8VHY0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg4Q8VHY0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg4Q8VHY0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cspg4Q8VHY0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.5■□□□□ 0.39
Cspg4Q8VHY0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Cspg4Q8VHY0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg4Q8VHY0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg4Q8VHY0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cspg4Q8VHY0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Cspg4Q8VHY0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Cspg4Q8VHY0 Gm13836-201ENSMUST00000121159 501 ntBASIC17.5■□□□□ 0.39
Cspg4Q8VHY0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.5■□□□□ 0.39
Cspg4Q8VHY0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg4Q8VHY0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg4Q8VHY0 Gm11421-201ENSMUST00000122124 294 ntBASIC17.49■□□□□ 0.39
Cspg4Q8VHY0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.49■□□□□ 0.39
Cspg4Q8VHY0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg4Q8VHY0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg4Q8VHY0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg4Q8VHY0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg4Q8VHY0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Cspg4Q8VHY0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.49■□□□□ 0.39
Cspg4Q8VHY0 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.49■□□□□ 0.39
Cspg4Q8VHY0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cspg4Q8VHY0 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.48■□□□□ 0.39
Cspg4Q8VHY0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cspg4Q8VHY0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg4Q8VHY0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cspg4Q8VHY0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.48■□□□□ 0.39
Cspg4Q8VHY0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.48■□□□□ 0.39
Cspg4Q8VHY0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cspg4Q8VHY0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg4Q8VHY0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg4Q8VHY0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cspg4Q8VHY0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg4Q8VHY0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg4Q8VHY0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.46■□□□□ 0.39
Cspg4Q8VHY0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg4Q8VHY0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg4Q8VHY0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg4Q8VHY0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg4Q8VHY0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cspg4Q8VHY0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms