Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh18Q8VHR0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh18Q8VHR0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pcdh18Q8VHR0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh18Q8VHR0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh18Q8VHR0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh18Q8VHR0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pcdh18Q8VHR0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pcdh18Q8VHR0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh18Q8VHR0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh18Q8VHR0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh18Q8VHR0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh18Q8VHR0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh18Q8VHR0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh18Q8VHR0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pcdh18Q8VHR0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdh18Q8VHR0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh18Q8VHR0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh18Q8VHR0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh18Q8VHR0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh18Q8VHR0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdh18Q8VHR0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh18Q8VHR0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh18Q8VHR0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh18Q8VHR0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh18Q8VHR0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdh18Q8VHR0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdh18Q8VHR0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.29■□□□□ 0.68
Pcdh18Q8VHR0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh18Q8VHR0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh18Q8VHR0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh18Q8VHR0 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.28■□□□□ 0.68
Pcdh18Q8VHR0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh18Q8VHR0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh18Q8VHR0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh18Q8VHR0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdh18Q8VHR0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh18Q8VHR0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.28■□□□□ 0.68
Pcdh18Q8VHR0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh18Q8VHR0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdh18Q8VHR0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh18Q8VHR0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdh18Q8VHR0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh18Q8VHR0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcdh18Q8VHR0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh18Q8VHR0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdh18Q8VHR0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh18Q8VHR0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Pcdh18Q8VHR0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh18Q8VHR0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh18Q8VHR0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh18Q8VHR0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh18Q8VHR0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh18Q8VHR0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Pcdh18Q8VHR0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh18Q8VHR0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms