Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab40bQ8VHP8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab40bQ8VHP8 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.2■□□□□ 0.5
Rab40bQ8VHP8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rab40bQ8VHP8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab40bQ8VHP8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab40bQ8VHP8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab40bQ8VHP8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rab40bQ8VHP8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab40bQ8VHP8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab40bQ8VHP8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rab40bQ8VHP8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.19■□□□□ 0.5
Rab40bQ8VHP8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Rab40bQ8VHP8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rab40bQ8VHP8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rab40bQ8VHP8 Gm7332-201ENSMUST00000118351 454 ntBASIC18.18■□□□□ 0.5
Rab40bQ8VHP8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rab40bQ8VHP8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.18■□□□□ 0.5
Rab40bQ8VHP8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab40bQ8VHP8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab40bQ8VHP8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40bQ8VHP8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.16■□□□□ 0.5
Rab40bQ8VHP8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40bQ8VHP8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40bQ8VHP8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40bQ8VHP8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40bQ8VHP8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40bQ8VHP8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40bQ8VHP8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40bQ8VHP8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.15■□□□□ 0.5
Rab40bQ8VHP8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rab40bQ8VHP8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.15■□□□□ 0.5
Rab40bQ8VHP8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rab40bQ8VHP8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.15■□□□□ 0.5
Rab40bQ8VHP8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab40bQ8VHP8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab40bQ8VHP8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab40bQ8VHP8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rab40bQ8VHP8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab40bQ8VHP8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab40bQ8VHP8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rab40bQ8VHP8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab40bQ8VHP8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab40bQ8VHP8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rab40bQ8VHP8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab40bQ8VHP8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab40bQ8VHP8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rab40bQ8VHP8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rab40bQ8VHP8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab40bQ8VHP8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab40bQ8VHP8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab40bQ8VHP8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rab40bQ8VHP8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.13■□□□□ 0.49
Rab40bQ8VHP8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rab40bQ8VHP8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab40bQ8VHP8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rab40bQ8VHP8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab40bQ8VHP8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab40bQ8VHP8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rab40bQ8VHP8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.12■□□□□ 0.49
Rab40bQ8VHP8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab40bQ8VHP8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab40bQ8VHP8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40bQ8VHP8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab40bQ8VHP8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.1■□□□□ 0.49
Rab40bQ8VHP8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab40bQ8VHP8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rab40bQ8VHP8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab40bQ8VHP8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms