Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20aQ8VDB9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20aQ8VDB9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20aQ8VDB9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20aQ8VDB9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Slc6a20aQ8VDB9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
Slc6a20aQ8VDB9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20aQ8VDB9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Slc6a20aQ8VDB9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20aQ8VDB9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20aQ8VDB9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Slc6a20aQ8VDB9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a20aQ8VDB9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a20aQ8VDB9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Slc6a20aQ8VDB9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20aQ8VDB9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20aQ8VDB9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20aQ8VDB9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.95■□□□□ 0.78
Slc6a20aQ8VDB9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Slc6a20aQ8VDB9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20aQ8VDB9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20aQ8VDB9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20aQ8VDB9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a20aQ8VDB9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a20aQ8VDB9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.93■□□□□ 0.78
Slc6a20aQ8VDB9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20aQ8VDB9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20aQ8VDB9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20aQ8VDB9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20aQ8VDB9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20aQ8VDB9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20aQ8VDB9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20aQ8VDB9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20aQ8VDB9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.93■□□□□ 0.78
Slc6a20aQ8VDB9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20aQ8VDB9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Slc6a20aQ8VDB9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20aQ8VDB9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20aQ8VDB9 Gm7417-201ENSMUST00000192950 473 ntBASIC19.92■□□□□ 0.78
Slc6a20aQ8VDB9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.92■□□□□ 0.78
Slc6a20aQ8VDB9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20aQ8VDB9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20aQ8VDB9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20aQ8VDB9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20aQ8VDB9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20aQ8VDB9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Slc6a20aQ8VDB9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20aQ8VDB9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20aQ8VDB9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.9■□□□□ 0.78
Slc6a20aQ8VDB9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Slc6a20aQ8VDB9 Etf1-202ENSMUST00000180351 108 ntBASIC19.89■□□□□ 0.77
Slc6a20aQ8VDB9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc6a20aQ8VDB9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc6a20aQ8VDB9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc6a20aQ8VDB9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a20aQ8VDB9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a20aQ8VDB9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a20aQ8VDB9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a20aQ8VDB9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.88■□□□□ 0.77
Slc6a20aQ8VDB9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms