Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sgms1Q8VCQ6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.94■■□□□ 1.1
Sgms1Q8VCQ6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sgms1Q8VCQ6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sgms1Q8VCQ6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sgms1Q8VCQ6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Sgms1Q8VCQ6 Gm7417-201ENSMUST00000192950 473 ntBASIC21.93■■□□□ 1.1
Sgms1Q8VCQ6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sgms1Q8VCQ6 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.93■■□□□ 1.1
Sgms1Q8VCQ6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.93■■□□□ 1.1
Sgms1Q8VCQ6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sgms1Q8VCQ6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sgms1Q8VCQ6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sgms1Q8VCQ6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sgms1Q8VCQ6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.92■■□□□ 1.1
Sgms1Q8VCQ6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sgms1Q8VCQ6 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.92■■□□□ 1.1
Sgms1Q8VCQ6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sgms1Q8VCQ6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sgms1Q8VCQ6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.91■■□□□ 1.1
Sgms1Q8VCQ6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sgms1Q8VCQ6 Gm9870-201ENSMUST00000063874 645 ntBASIC21.91■■□□□ 1.1
Sgms1Q8VCQ6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sgms1Q8VCQ6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Sgms1Q8VCQ6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sgms1Q8VCQ6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sgms1Q8VCQ6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.9■■□□□ 1.1
Sgms1Q8VCQ6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sgms1Q8VCQ6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sgms1Q8VCQ6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Sgms1Q8VCQ6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sgms1Q8VCQ6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sgms1Q8VCQ6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.1
Sgms1Q8VCQ6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sgms1Q8VCQ6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Sgms1Q8VCQ6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.89■■□□□ 1.09
Sgms1Q8VCQ6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sgms1Q8VCQ6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Sgms1Q8VCQ6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.89■■□□□ 1.09
Sgms1Q8VCQ6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sgms1Q8VCQ6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Sgms1Q8VCQ6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sgms1Q8VCQ6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sgms1Q8VCQ6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sgms1Q8VCQ6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sgms1Q8VCQ6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sgms1Q8VCQ6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sgms1Q8VCQ6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sgms1Q8VCQ6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sgms1Q8VCQ6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sgms1Q8VCQ6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.86■■□□□ 1.09
Sgms1Q8VCQ6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.86■■□□□ 1.09
Sgms1Q8VCQ6 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.86■■□□□ 1.09
Sgms1Q8VCQ6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Notumos-201ENSMUST00000151998 2659 ntBASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sgms1Q8VCQ6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sgms1Q8VCQ6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sgms1Q8VCQ6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sgms1Q8VCQ6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.84■■□□□ 1.09
Sgms1Q8VCQ6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Sgms1Q8VCQ6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sgms1Q8VCQ6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sgms1Q8VCQ6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sgms1Q8VCQ6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Sgms1Q8VCQ6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sgms1Q8VCQ6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sgms1Q8VCQ6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Sgms1Q8VCQ6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Sgms1Q8VCQ6 Gm15039-201ENSMUST00000118914 875 ntBASIC21.83■■□□□ 1.09
Sgms1Q8VCQ6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.83■■□□□ 1.09
Sgms1Q8VCQ6 Gm43530-201ENSMUST00000195920 274 ntBASIC21.83■■□□□ 1.09
Sgms1Q8VCQ6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms