Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf8Q8VC56 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.35■□□□□ 0.69
Rnf8Q8VC56 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rnf8Q8VC56 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf8Q8VC56 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf8Q8VC56 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf8Q8VC56 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf8Q8VC56 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf8Q8VC56 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf8Q8VC56 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.33■□□□□ 0.68
Rnf8Q8VC56 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf8Q8VC56 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Rnf8Q8VC56 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf8Q8VC56 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf8Q8VC56 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.32■□□□□ 0.68
Rnf8Q8VC56 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf8Q8VC56 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rnf8Q8VC56 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf8Q8VC56 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf8Q8VC56 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.32■□□□□ 0.68
Rnf8Q8VC56 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rnf8Q8VC56 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.32■□□□□ 0.68
Rnf8Q8VC56 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.32■□□□□ 0.68
Rnf8Q8VC56 Gm40881-201ENSMUST00000223397 166 ntBASIC19.32■□□□□ 0.68
Rnf8Q8VC56 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.32■□□□□ 0.68
Rnf8Q8VC56 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf8Q8VC56 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf8Q8VC56 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf8Q8VC56 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf8Q8VC56 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf8Q8VC56 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf8Q8VC56 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf8Q8VC56 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.31■□□□□ 0.68
Rnf8Q8VC56 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf8Q8VC56 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf8Q8VC56 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.31■□□□□ 0.68
Rnf8Q8VC56 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf8Q8VC56 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf8Q8VC56 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf8Q8VC56 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf8Q8VC56 Etf1-202ENSMUST00000180351 108 ntBASIC19.3■□□□□ 0.68
Rnf8Q8VC56 Gm9959-201ENSMUST00000068277 390 ntBASIC19.3■□□□□ 0.68
Rnf8Q8VC56 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf8Q8VC56 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf8Q8VC56 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf8Q8VC56 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf8Q8VC56 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.29■□□□□ 0.68
Rnf8Q8VC56 Gm7417-201ENSMUST00000192950 473 ntBASIC19.29■□□□□ 0.68
Rnf8Q8VC56 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf8Q8VC56 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf8Q8VC56 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf8Q8VC56 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Rnf8Q8VC56 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf8Q8VC56 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf8Q8VC56 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf8Q8VC56 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf8Q8VC56 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.28■□□□□ 0.68
Rnf8Q8VC56 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf8Q8VC56 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf8Q8VC56 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf8Q8VC56 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf8Q8VC56 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf8Q8VC56 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf8Q8VC56 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf8Q8VC56 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf8Q8VC56 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf8Q8VC56 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf8Q8VC56 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms