Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd2Q8R3K3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd2Q8R3K3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.6■■□□□ 1.05
Ptcd2Q8R3K3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd2Q8R3K3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd2Q8R3K3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.6■■□□□ 1.05
Ptcd2Q8R3K3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd2Q8R3K3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.59■■□□□ 1.05
Ptcd2Q8R3K3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptcd2Q8R3K3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Ptcd2Q8R3K3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptcd2Q8R3K3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ptcd2Q8R3K3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptcd2Q8R3K3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ptcd2Q8R3K3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptcd2Q8R3K3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptcd2Q8R3K3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptcd2Q8R3K3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.58■■□□□ 1.05
Ptcd2Q8R3K3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.58■■□□□ 1.05
Ptcd2Q8R3K3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd2Q8R3K3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd2Q8R3K3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd2Q8R3K3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.57■■□□□ 1.04
Ptcd2Q8R3K3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.57■■□□□ 1.04
Ptcd2Q8R3K3 Gm5408-201ENSMUST00000197998 747 ntBASIC21.57■■□□□ 1.04
Ptcd2Q8R3K3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ptcd2Q8R3K3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd2Q8R3K3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd2Q8R3K3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd2Q8R3K3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd2Q8R3K3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptcd2Q8R3K3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptcd2Q8R3K3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ptcd2Q8R3K3 Gm7290-201ENSMUST00000104990 617 ntBASIC21.56■■□□□ 1.04
Ptcd2Q8R3K3 Gm12918-201ENSMUST00000120234 636 ntBASIC21.56■■□□□ 1.04
Ptcd2Q8R3K3 Gm15710-201ENSMUST00000121821 636 ntBASIC21.56■■□□□ 1.04
Ptcd2Q8R3K3 Gm5075-201ENSMUST00000196916 622 ntBASIC21.56■■□□□ 1.04
Ptcd2Q8R3K3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.56■■□□□ 1.04
Ptcd2Q8R3K3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.56■■□□□ 1.04
Ptcd2Q8R3K3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptcd2Q8R3K3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptcd2Q8R3K3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ptcd2Q8R3K3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptcd2Q8R3K3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptcd2Q8R3K3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptcd2Q8R3K3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptcd2Q8R3K3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptcd2Q8R3K3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptcd2Q8R3K3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptcd2Q8R3K3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ptcd2Q8R3K3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.54■■□□□ 1.04
Ptcd2Q8R3K3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Ptcd2Q8R3K3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Ptcd2Q8R3K3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 Gm37856-201ENSMUST00000191634 999 ntBASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptcd2Q8R3K3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ptcd2Q8R3K3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ptcd2Q8R3K3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ptcd2Q8R3K3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ptcd2Q8R3K3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ptcd2Q8R3K3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ptcd2Q8R3K3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ptcd2Q8R3K3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ptcd2Q8R3K3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.52■■□□□ 1.04
Ptcd2Q8R3K3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Gm13148-201ENSMUST00000118892 745 ntBASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ptcd2Q8R3K3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ptcd2Q8R3K3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ptcd2Q8R3K3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.5■■□□□ 1.03
Ptcd2Q8R3K3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ptcd2Q8R3K3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ptcd2Q8R3K3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd2Q8R3K3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd2Q8R3K3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
Ptcd2Q8R3K3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd2Q8R3K3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms