Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Sf3a1Q8K4Z5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sf3a1Q8K4Z5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Sf3a1Q8K4Z5 Gm43530-201ENSMUST00000195920 274 ntBASIC24.75■■□□□ 1.55
Sf3a1Q8K4Z5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sf3a1Q8K4Z5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sf3a1Q8K4Z5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.74■■□□□ 1.55
Sf3a1Q8K4Z5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sf3a1Q8K4Z5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Sf3a1Q8K4Z5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Sf3a1Q8K4Z5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sf3a1Q8K4Z5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sf3a1Q8K4Z5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sf3a1Q8K4Z5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Sf3a1Q8K4Z5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
Sf3a1Q8K4Z5 Gm13241-201ENSMUST00000094493 780 ntBASIC24.73■■□□□ 1.55
Sf3a1Q8K4Z5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Sf3a1Q8K4Z5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Sf3a1Q8K4Z5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Sf3a1Q8K4Z5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC24.72■■□□□ 1.55
Sf3a1Q8K4Z5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24.72■■□□□ 1.55
Sf3a1Q8K4Z5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC24.72■■□□□ 1.55
Sf3a1Q8K4Z5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sf3a1Q8K4Z5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sf3a1Q8K4Z5 Gm21956-201ENSMUST00000179946 522 ntBASIC24.71■■□□□ 1.55
Sf3a1Q8K4Z5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
Sf3a1Q8K4Z5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sf3a1Q8K4Z5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Sf3a1Q8K4Z5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Sf3a1Q8K4Z5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Sf3a1Q8K4Z5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Sf3a1Q8K4Z5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Sf3a1Q8K4Z5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Sf3a1Q8K4Z5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Sf3a1Q8K4Z5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sf3a1Q8K4Z5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.69■■□□□ 1.54
Sf3a1Q8K4Z5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.69■■□□□ 1.54
Sf3a1Q8K4Z5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sf3a1Q8K4Z5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sf3a1Q8K4Z5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sf3a1Q8K4Z5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sf3a1Q8K4Z5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sf3a1Q8K4Z5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC24.69■■□□□ 1.54
Sf3a1Q8K4Z5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sf3a1Q8K4Z5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Sf3a1Q8K4Z5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Sf3a1Q8K4Z5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sf3a1Q8K4Z5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sf3a1Q8K4Z5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sf3a1Q8K4Z5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC24.68■■□□□ 1.54
Sf3a1Q8K4Z5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Sf3a1Q8K4Z5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
Sf3a1Q8K4Z5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Sf3a1Q8K4Z5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sf3a1Q8K4Z5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sf3a1Q8K4Z5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sf3a1Q8K4Z5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sf3a1Q8K4Z5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sf3a1Q8K4Z5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sf3a1Q8K4Z5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Sf3a1Q8K4Z5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sf3a1Q8K4Z5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sf3a1Q8K4Z5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Sf3a1Q8K4Z5 Gm43034-201ENSMUST00000198678 1364 ntBASIC24.67■■□□□ 1.54
Sf3a1Q8K4Z5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sf3a1Q8K4Z5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sf3a1Q8K4Z5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sf3a1Q8K4Z5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Sf3a1Q8K4Z5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sf3a1Q8K4Z5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC24.66■■□□□ 1.54
Sf3a1Q8K4Z5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Sf3a1Q8K4Z5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sf3a1Q8K4Z5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.66■■□□□ 1.54
Sf3a1Q8K4Z5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sf3a1Q8K4Z5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC24.65■■□□□ 1.54
Sf3a1Q8K4Z5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sf3a1Q8K4Z5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sf3a1Q8K4Z5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Sf3a1Q8K4Z5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Sf3a1Q8K4Z5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Sf3a1Q8K4Z5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Sf3a1Q8K4Z5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC24.64■■□□□ 1.54
Sf3a1Q8K4Z5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Sf3a1Q8K4Z5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Sf3a1Q8K4Z5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Sf3a1Q8K4Z5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Sf3a1Q8K4Z5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sf3a1Q8K4Z5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sf3a1Q8K4Z5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Sf3a1Q8K4Z5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Sf3a1Q8K4Z5 Gm8770-201ENSMUST00000121113 1109 ntBASIC24.63■■□□□ 1.53
Sf3a1Q8K4Z5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sf3a1Q8K4Z5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC24.62■■□□□ 1.53
Sf3a1Q8K4Z5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sf3a1Q8K4Z5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC24.62■■□□□ 1.53
Sf3a1Q8K4Z5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC24.62■■□□□ 1.53
Sf3a1Q8K4Z5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sf3a1Q8K4Z5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sf3a1Q8K4Z5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Sf3a1Q8K4Z5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms