Protein–RNA interactions for Protein: Q8K158

Cnppd1, Protein CNPPD1, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnppd1Q8K158 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnppd1Q8K158 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnppd1Q8K158 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnppd1Q8K158 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnppd1Q8K158 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.23■□□□□ 0.51
Cnppd1Q8K158 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnppd1Q8K158 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnppd1Q8K158 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnppd1Q8K158 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnppd1Q8K158 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.23■□□□□ 0.51
Cnppd1Q8K158 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.23■□□□□ 0.51
Cnppd1Q8K158 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnppd1Q8K158 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnppd1Q8K158 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnppd1Q8K158 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cnppd1Q8K158 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnppd1Q8K158 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnppd1Q8K158 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.22■□□□□ 0.51
Cnppd1Q8K158 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnppd1Q8K158 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.21■□□□□ 0.51
Cnppd1Q8K158 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnppd1Q8K158 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnppd1Q8K158 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.2■□□□□ 0.5
Cnppd1Q8K158 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnppd1Q8K158 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.2■□□□□ 0.5
Cnppd1Q8K158 Gm14117-201ENSMUST00000122417 843 ntBASIC18.2■□□□□ 0.5
Cnppd1Q8K158 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.2■□□□□ 0.5
Cnppd1Q8K158 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.2■□□□□ 0.5
Cnppd1Q8K158 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cnppd1Q8K158 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cnppd1Q8K158 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cnppd1Q8K158 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cnppd1Q8K158 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnppd1Q8K158 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnppd1Q8K158 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.19■□□□□ 0.5
Cnppd1Q8K158 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnppd1Q8K158 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnppd1Q8K158 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnppd1Q8K158 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnppd1Q8K158 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnppd1Q8K158 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnppd1Q8K158 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cnppd1Q8K158 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnppd1Q8K158 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnppd1Q8K158 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnppd1Q8K158 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnppd1Q8K158 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnppd1Q8K158 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.17■□□□□ 0.5
Cnppd1Q8K158 Gm45102-201ENSMUST00000207427 857 ntBASIC18.17■□□□□ 0.5
Cnppd1Q8K158 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnppd1Q8K158 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnppd1Q8K158 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnppd1Q8K158 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnppd1Q8K158 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnppd1Q8K158 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cnppd1Q8K158 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cnppd1Q8K158 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.16■□□□□ 0.5
Cnppd1Q8K158 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cnppd1Q8K158 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnppd1Q8K158 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Cnppd1Q8K158 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.16■□□□□ 0.5
Cnppd1Q8K158 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnppd1Q8K158 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnppd1Q8K158 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnppd1Q8K158 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cnppd1Q8K158 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnppd1Q8K158 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnppd1Q8K158 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnppd1Q8K158 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms