Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Rtn1Q8K0T0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Rtn1Q8K0T0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rtn1Q8K0T0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn1Q8K0T0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn1Q8K0T0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Rtn1Q8K0T0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn1Q8K0T0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn1Q8K0T0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn1Q8K0T0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn1Q8K0T0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn1Q8K0T0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn1Q8K0T0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn1Q8K0T0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rtn1Q8K0T0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rtn1Q8K0T0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rtn1Q8K0T0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rtn1Q8K0T0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rtn1Q8K0T0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.38■■□□□ 1.33
Rtn1Q8K0T0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rtn1Q8K0T0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Rtn1Q8K0T0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rtn1Q8K0T0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rtn1Q8K0T0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rtn1Q8K0T0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rtn1Q8K0T0 Gm12922-201ENSMUST00000120626 809 ntBASIC23.37■■□□□ 1.33
Rtn1Q8K0T0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rtn1Q8K0T0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rtn1Q8K0T0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rtn1Q8K0T0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rtn1Q8K0T0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rtn1Q8K0T0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rtn1Q8K0T0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.36■■□□□ 1.33
Rtn1Q8K0T0 Golgb1-201ENSMUST00000023534 498 ntBASIC23.36■■□□□ 1.33
Rtn1Q8K0T0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rtn1Q8K0T0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rtn1Q8K0T0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rtn1Q8K0T0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Rtn1Q8K0T0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Rtn1Q8K0T0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rtn1Q8K0T0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rtn1Q8K0T0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rtn1Q8K0T0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rtn1Q8K0T0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rtn1Q8K0T0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rtn1Q8K0T0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rtn1Q8K0T0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rtn1Q8K0T0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rtn1Q8K0T0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rtn1Q8K0T0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rtn1Q8K0T0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.34■■□□□ 1.33
Rtn1Q8K0T0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rtn1Q8K0T0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rtn1Q8K0T0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rtn1Q8K0T0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rtn1Q8K0T0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Rtn1Q8K0T0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rtn1Q8K0T0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Rtn1Q8K0T0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rtn1Q8K0T0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rtn1Q8K0T0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rtn1Q8K0T0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rtn1Q8K0T0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rtn1Q8K0T0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
Rtn1Q8K0T0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rtn1Q8K0T0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rtn1Q8K0T0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rtn1Q8K0T0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rtn1Q8K0T0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rtn1Q8K0T0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rtn1Q8K0T0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Rtn1Q8K0T0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rtn1Q8K0T0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Rtn1Q8K0T0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.31■■□□□ 1.32
Rtn1Q8K0T0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rtn1Q8K0T0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.31■■□□□ 1.32
Rtn1Q8K0T0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rtn1Q8K0T0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.31■■□□□ 1.32
Rtn1Q8K0T0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn1Q8K0T0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn1Q8K0T0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn1Q8K0T0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn1Q8K0T0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.3■■□□□ 1.32
Rtn1Q8K0T0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Rtn1Q8K0T0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn1Q8K0T0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn1Q8K0T0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.3■■□□□ 1.32
Rtn1Q8K0T0 Gm9847-201ENSMUST00000052528 599 ntBASIC23.3■■□□□ 1.32
Rtn1Q8K0T0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC23.3■■□□□ 1.32
Rtn1Q8K0T0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rtn1Q8K0T0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rtn1Q8K0T0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.29■■□□□ 1.32
Rtn1Q8K0T0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rtn1Q8K0T0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rtn1Q8K0T0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
Rtn1Q8K0T0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rtn1Q8K0T0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rtn1Q8K0T0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
Rtn1Q8K0T0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.28■■□□□ 1.32
Rtn1Q8K0T0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms