Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rab11fip3Q8CHD8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rab11fip3Q8CHD8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rab11fip3Q8CHD8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rab11fip3Q8CHD8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rab11fip3Q8CHD8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Rab11fip3Q8CHD8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Rab11fip3Q8CHD8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rab11fip3Q8CHD8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rab11fip3Q8CHD8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
Rab11fip3Q8CHD8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Rab11fip3Q8CHD8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC26.32■■□□□ 1.8
Rab11fip3Q8CHD8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rab11fip3Q8CHD8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rab11fip3Q8CHD8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Rab11fip3Q8CHD8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC26.32■■□□□ 1.8
Rab11fip3Q8CHD8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rab11fip3Q8CHD8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rab11fip3Q8CHD8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rab11fip3Q8CHD8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
Rab11fip3Q8CHD8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Rab11fip3Q8CHD8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rab11fip3Q8CHD8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rab11fip3Q8CHD8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Rab11fip3Q8CHD8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rab11fip3Q8CHD8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rab11fip3Q8CHD8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC26.3■■□□□ 1.8
Rab11fip3Q8CHD8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rab11fip3Q8CHD8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rab11fip3Q8CHD8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rab11fip3Q8CHD8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC26.29■■□□□ 1.8
Rab11fip3Q8CHD8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Rab11fip3Q8CHD8 Gm18284-201ENSMUST00000172604 624 ntBASIC26.29■■□□□ 1.8
Rab11fip3Q8CHD8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rab11fip3Q8CHD8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Rab11fip3Q8CHD8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Rab11fip3Q8CHD8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC26.29■■□□□ 1.8
Rab11fip3Q8CHD8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Rab11fip3Q8CHD8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rab11fip3Q8CHD8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
Rab11fip3Q8CHD8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rab11fip3Q8CHD8 Gm26833-201ENSMUST00000180899 440 ntBASIC26.28■■□□□ 1.8
Rab11fip3Q8CHD8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Rab11fip3Q8CHD8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rab11fip3Q8CHD8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rab11fip3Q8CHD8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rab11fip3Q8CHD8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rab11fip3Q8CHD8 Gm8495-201ENSMUST00000188740 694 ntBASIC26.27■■□□□ 1.8
Rab11fip3Q8CHD8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rab11fip3Q8CHD8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rab11fip3Q8CHD8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rab11fip3Q8CHD8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rab11fip3Q8CHD8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rab11fip3Q8CHD8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rab11fip3Q8CHD8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rab11fip3Q8CHD8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rab11fip3Q8CHD8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Rab11fip3Q8CHD8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rab11fip3Q8CHD8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rab11fip3Q8CHD8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Rab11fip3Q8CHD8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rab11fip3Q8CHD8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rab11fip3Q8CHD8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rab11fip3Q8CHD8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rab11fip3Q8CHD8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rab11fip3Q8CHD8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rab11fip3Q8CHD8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rab11fip3Q8CHD8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Rab11fip3Q8CHD8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rab11fip3Q8CHD8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC26.24■■□□□ 1.79
Rab11fip3Q8CHD8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC26.24■■□□□ 1.79
Rab11fip3Q8CHD8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rab11fip3Q8CHD8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Rab11fip3Q8CHD8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rab11fip3Q8CHD8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rab11fip3Q8CHD8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC26.23■■□□□ 1.79
Rab11fip3Q8CHD8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rab11fip3Q8CHD8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rab11fip3Q8CHD8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rab11fip3Q8CHD8 Gm13042-201ENSMUST00000119244 1955 ntBASIC26.23■■□□□ 1.79
Rab11fip3Q8CHD8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rab11fip3Q8CHD8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rab11fip3Q8CHD8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rab11fip3Q8CHD8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rab11fip3Q8CHD8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rab11fip3Q8CHD8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rab11fip3Q8CHD8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC26.22■■□□□ 1.79
Rab11fip3Q8CHD8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms