Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hist3h2bbQ8CGP0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Hist3h2bbQ8CGP0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist3h2bbQ8CGP0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist3h2bbQ8CGP0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hist3h2bbQ8CGP0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Hist3h2bbQ8CGP0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist3h2bbQ8CGP0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Hist3h2bbQ8CGP0 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.42■□□□□ 0.06
Hist3h2bbQ8CGP0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hist3h2bbQ8CGP0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Hist3h2bbQ8CGP0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist3h2bbQ8CGP0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist3h2bbQ8CGP0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist3h2bbQ8CGP0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist3h2bbQ8CGP0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist3h2bbQ8CGP0 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.41■□□□□ 0.06
Hist3h2bbQ8CGP0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist3h2bbQ8CGP0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Hist3h2bbQ8CGP0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Hist3h2bbQ8CGP0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist3h2bbQ8CGP0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist3h2bbQ8CGP0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist3h2bbQ8CGP0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist3h2bbQ8CGP0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hist3h2bbQ8CGP0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms