Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smco1Q8CEZ1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smco1Q8CEZ1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smco1Q8CEZ1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smco1Q8CEZ1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.43■□□□□ 0.54
Smco1Q8CEZ1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smco1Q8CEZ1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smco1Q8CEZ1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smco1Q8CEZ1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.42■□□□□ 0.54
Smco1Q8CEZ1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smco1Q8CEZ1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smco1Q8CEZ1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Smco1Q8CEZ1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smco1Q8CEZ1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smco1Q8CEZ1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco1Q8CEZ1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smco1Q8CEZ1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smco1Q8CEZ1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smco1Q8CEZ1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smco1Q8CEZ1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smco1Q8CEZ1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.4■□□□□ 0.54
Smco1Q8CEZ1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smco1Q8CEZ1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smco1Q8CEZ1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco1Q8CEZ1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco1Q8CEZ1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco1Q8CEZ1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smco1Q8CEZ1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smco1Q8CEZ1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smco1Q8CEZ1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.38■□□□□ 0.53
Smco1Q8CEZ1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smco1Q8CEZ1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smco1Q8CEZ1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smco1Q8CEZ1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smco1Q8CEZ1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smco1Q8CEZ1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.36■□□□□ 0.53
Smco1Q8CEZ1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.36■□□□□ 0.53
Smco1Q8CEZ1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smco1Q8CEZ1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smco1Q8CEZ1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smco1Q8CEZ1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco1Q8CEZ1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smco1Q8CEZ1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smco1Q8CEZ1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smco1Q8CEZ1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smco1Q8CEZ1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms