Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc17Q8CE13 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc17Q8CE13 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc17Q8CE13 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc17Q8CE13 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc17Q8CE13 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc17Q8CE13 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc17Q8CE13 Gm40848-201ENSMUST00000221998 324 ntBASIC20.9■□□□□ 0.94
Ccdc17Q8CE13 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc17Q8CE13 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc17Q8CE13 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc17Q8CE13 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc17Q8CE13 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Ccdc17Q8CE13 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.89■□□□□ 0.93
Ccdc17Q8CE13 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ccdc17Q8CE13 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.89■□□□□ 0.93
Ccdc17Q8CE13 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.89■□□□□ 0.93
Ccdc17Q8CE13 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
Ccdc17Q8CE13 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.89■□□□□ 0.93
Ccdc17Q8CE13 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc17Q8CE13 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc17Q8CE13 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc17Q8CE13 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc17Q8CE13 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc17Q8CE13 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc17Q8CE13 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc17Q8CE13 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc17Q8CE13 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ccdc17Q8CE13 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc17Q8CE13 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc17Q8CE13 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc17Q8CE13 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.88■□□□□ 0.93
Ccdc17Q8CE13 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc17Q8CE13 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc17Q8CE13 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ccdc17Q8CE13 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc17Q8CE13 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.87■□□□□ 0.93
Ccdc17Q8CE13 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
Ccdc17Q8CE13 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc17Q8CE13 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Ccdc17Q8CE13 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc17Q8CE13 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc17Q8CE13 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ccdc17Q8CE13 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Ccdc17Q8CE13 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc17Q8CE13 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.87■□□□□ 0.93
Ccdc17Q8CE13 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc17Q8CE13 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc17Q8CE13 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc17Q8CE13 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc17Q8CE13 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc17Q8CE13 Gm42642-201ENSMUST00000200683 355 ntBASIC20.86■□□□□ 0.93
Ccdc17Q8CE13 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc17Q8CE13 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc17Q8CE13 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc17Q8CE13 Gm10493-201ENSMUST00000097270 612 ntBASIC20.86■□□□□ 0.93
Ccdc17Q8CE13 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc17Q8CE13 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.86■□□□□ 0.93
Ccdc17Q8CE13 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc17Q8CE13 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc17Q8CE13 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc17Q8CE13 Spcs1-204ENSMUST00000226782 949 ntBASIC20.85■□□□□ 0.93
Ccdc17Q8CE13 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc17Q8CE13 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc17Q8CE13 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc17Q8CE13 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc17Q8CE13 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc17Q8CE13 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc17Q8CE13 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc17Q8CE13 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc17Q8CE13 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc17Q8CE13 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc17Q8CE13 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc17Q8CE13 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.84■□□□□ 0.93
Ccdc17Q8CE13 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc17Q8CE13 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc17Q8CE13 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc17Q8CE13 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc17Q8CE13 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc17Q8CE13 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc17Q8CE13 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc17Q8CE13 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc17Q8CE13 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc17Q8CE13 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc17Q8CE13 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc17Q8CE13 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 Gm27405-201ENSMUST00000184201 112 ntBASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc17Q8CE13 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc17Q8CE13 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms