Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Shisa4Q8CA71 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shisa4Q8CA71 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.77■■□□□ 1.4
Shisa4Q8CA71 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Shisa4Q8CA71 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shisa4Q8CA71 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shisa4Q8CA71 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
Shisa4Q8CA71 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shisa4Q8CA71 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shisa4Q8CA71 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shisa4Q8CA71 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Shisa4Q8CA71 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shisa4Q8CA71 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Shisa4Q8CA71 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shisa4Q8CA71 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.76■■□□□ 1.39
Shisa4Q8CA71 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Shisa4Q8CA71 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shisa4Q8CA71 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Shisa4Q8CA71 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shisa4Q8CA71 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Shisa4Q8CA71 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shisa4Q8CA71 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shisa4Q8CA71 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shisa4Q8CA71 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shisa4Q8CA71 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shisa4Q8CA71 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Shisa4Q8CA71 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.74■■□□□ 1.39
Shisa4Q8CA71 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shisa4Q8CA71 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shisa4Q8CA71 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Shisa4Q8CA71 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shisa4Q8CA71 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shisa4Q8CA71 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shisa4Q8CA71 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shisa4Q8CA71 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.73■■□□□ 1.39
Shisa4Q8CA71 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shisa4Q8CA71 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shisa4Q8CA71 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Shisa4Q8CA71 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shisa4Q8CA71 Gm12821-201ENSMUST00000120022 600 ntBASIC23.72■■□□□ 1.39
Shisa4Q8CA71 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Shisa4Q8CA71 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shisa4Q8CA71 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shisa4Q8CA71 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shisa4Q8CA71 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Shisa4Q8CA71 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shisa4Q8CA71 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shisa4Q8CA71 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shisa4Q8CA71 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shisa4Q8CA71 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shisa4Q8CA71 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.71■■□□□ 1.39
Shisa4Q8CA71 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Shisa4Q8CA71 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.71■■□□□ 1.39
Shisa4Q8CA71 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.71■■□□□ 1.39
Shisa4Q8CA71 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.71■■□□□ 1.39
Shisa4Q8CA71 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shisa4Q8CA71 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Shisa4Q8CA71 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Shisa4Q8CA71 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Shisa4Q8CA71 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Shisa4Q8CA71 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shisa4Q8CA71 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shisa4Q8CA71 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Shisa4Q8CA71 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Shisa4Q8CA71 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Shisa4Q8CA71 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shisa4Q8CA71 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Shisa4Q8CA71 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.69■■□□□ 1.38
Shisa4Q8CA71 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shisa4Q8CA71 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Shisa4Q8CA71 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Shisa4Q8CA71 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Shisa4Q8CA71 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Shisa4Q8CA71 Gm27454-201ENSMUST00000185090 204 ntBASIC23.68■■□□□ 1.38
Shisa4Q8CA71 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Shisa4Q8CA71 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Shisa4Q8CA71 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Shisa4Q8CA71 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Shisa4Q8CA71 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Shisa4Q8CA71 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.67■■□□□ 1.38
Shisa4Q8CA71 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Shisa4Q8CA71 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Shisa4Q8CA71 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Shisa4Q8CA71 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Shisa4Q8CA71 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Shisa4Q8CA71 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Shisa4Q8CA71 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Shisa4Q8CA71 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Shisa4Q8CA71 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Shisa4Q8CA71 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Shisa4Q8CA71 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Shisa4Q8CA71 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.66■■□□□ 1.38
Shisa4Q8CA71 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Shisa4Q8CA71 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.66■■□□□ 1.38
Shisa4Q8CA71 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Shisa4Q8CA71 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Shisa4Q8CA71 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Shisa4Q8CA71 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Shisa4Q8CA71 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.65■■□□□ 1.38
Shisa4Q8CA71 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms