Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Aph1bQ8C7N7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Aph1bQ8C7N7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.11■□□□□ 0.81
Aph1bQ8C7N7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Aph1bQ8C7N7 Gm10232-201ENSMUST00000089221 720 ntBASIC20.11■□□□□ 0.81
Aph1bQ8C7N7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Aph1bQ8C7N7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Aph1bQ8C7N7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Aph1bQ8C7N7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Aph1bQ8C7N7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Aph1bQ8C7N7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Aph1bQ8C7N7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Aph1bQ8C7N7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.09■□□□□ 0.81
Aph1bQ8C7N7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Aph1bQ8C7N7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Aph1bQ8C7N7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Aph1bQ8C7N7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Aph1bQ8C7N7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Aph1bQ8C7N7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Aph1bQ8C7N7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Aph1bQ8C7N7 Iqck-206ENSMUST00000208658 2891 ntBASIC20.09■□□□□ 0.81
Aph1bQ8C7N7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Aph1bQ8C7N7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Aph1bQ8C7N7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Aph1bQ8C7N7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Aph1bQ8C7N7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Aph1bQ8C7N7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Aph1bQ8C7N7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Aph1bQ8C7N7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Aph1bQ8C7N7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Aph1bQ8C7N7 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.07■□□□□ 0.8
Aph1bQ8C7N7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Aph1bQ8C7N7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Aph1bQ8C7N7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.07■□□□□ 0.8
Aph1bQ8C7N7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Aph1bQ8C7N7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Aph1bQ8C7N7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aph1bQ8C7N7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Aph1bQ8C7N7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Aph1bQ8C7N7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Aph1bQ8C7N7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Aph1bQ8C7N7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aph1bQ8C7N7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Aph1bQ8C7N7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aph1bQ8C7N7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aph1bQ8C7N7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Aph1bQ8C7N7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aph1bQ8C7N7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.05■□□□□ 0.8
Aph1bQ8C7N7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Aph1bQ8C7N7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aph1bQ8C7N7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Aph1bQ8C7N7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Aph1bQ8C7N7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Aph1bQ8C7N7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Aph1bQ8C7N7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Aph1bQ8C7N7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Aph1bQ8C7N7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Aph1bQ8C7N7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Aph1bQ8C7N7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.04■□□□□ 0.8
Aph1bQ8C7N7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.04■□□□□ 0.8
Aph1bQ8C7N7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Aph1bQ8C7N7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aph1bQ8C7N7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aph1bQ8C7N7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Aph1bQ8C7N7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.03■□□□□ 0.8
Aph1bQ8C7N7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Aph1bQ8C7N7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.03■□□□□ 0.8
Aph1bQ8C7N7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Aph1bQ8C7N7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Aph1bQ8C7N7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Aph1bQ8C7N7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Aph1bQ8C7N7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.02■□□□□ 0.8
Aph1bQ8C7N7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Aph1bQ8C7N7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Aph1bQ8C7N7 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.02■□□□□ 0.8
Aph1bQ8C7N7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Aph1bQ8C7N7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Aph1bQ8C7N7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.02■□□□□ 0.79
Aph1bQ8C7N7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Aph1bQ8C7N7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Aph1bQ8C7N7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Aph1bQ8C7N7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.01■□□□□ 0.79
Aph1bQ8C7N7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Aph1bQ8C7N7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.01■□□□□ 0.79
Aph1bQ8C7N7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Aph1bQ8C7N7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.01■□□□□ 0.79
Aph1bQ8C7N7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Aph1bQ8C7N7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms