Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpc5Q8C7D3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc5Q8C7D3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc5Q8C7D3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pabpc5Q8C7D3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc5Q8C7D3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc5Q8C7D3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc5Q8C7D3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc5Q8C7D3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pabpc5Q8C7D3 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.2■□□□□ 0.82
Pabpc5Q8C7D3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc5Q8C7D3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc5Q8C7D3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc5Q8C7D3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc5Q8C7D3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc5Q8C7D3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc5Q8C7D3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.19■□□□□ 0.82
Pabpc5Q8C7D3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc5Q8C7D3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpc5Q8C7D3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpc5Q8C7D3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpc5Q8C7D3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpc5Q8C7D3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpc5Q8C7D3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.18■□□□□ 0.82
Pabpc5Q8C7D3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpc5Q8C7D3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pabpc5Q8C7D3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpc5Q8C7D3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pabpc5Q8C7D3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpc5Q8C7D3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pabpc5Q8C7D3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpc5Q8C7D3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.17■□□□□ 0.82
Pabpc5Q8C7D3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.17■□□□□ 0.82
Pabpc5Q8C7D3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpc5Q8C7D3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.17■□□□□ 0.82
Pabpc5Q8C7D3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Pabpc5Q8C7D3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpc5Q8C7D3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpc5Q8C7D3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpc5Q8C7D3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pabpc5Q8C7D3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc5Q8C7D3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc5Q8C7D3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pabpc5Q8C7D3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc5Q8C7D3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc5Q8C7D3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pabpc5Q8C7D3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pabpc5Q8C7D3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc5Q8C7D3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc5Q8C7D3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc5Q8C7D3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc5Q8C7D3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc5Q8C7D3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pabpc5Q8C7D3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pabpc5Q8C7D3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pabpc5Q8C7D3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.14■□□□□ 0.81
Pabpc5Q8C7D3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pabpc5Q8C7D3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pabpc5Q8C7D3 Gm18284-201ENSMUST00000172604 624 ntBASIC20.14■□□□□ 0.81
Pabpc5Q8C7D3 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.14■□□□□ 0.81
Pabpc5Q8C7D3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pabpc5Q8C7D3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pabpc5Q8C7D3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pabpc5Q8C7D3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pabpc5Q8C7D3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pabpc5Q8C7D3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pabpc5Q8C7D3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pabpc5Q8C7D3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.13■□□□□ 0.81
Pabpc5Q8C7D3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pabpc5Q8C7D3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pabpc5Q8C7D3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pabpc5Q8C7D3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.13■□□□□ 0.81
Pabpc5Q8C7D3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pabpc5Q8C7D3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.13■□□□□ 0.81
Pabpc5Q8C7D3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpc5Q8C7D3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pabpc5Q8C7D3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpc5Q8C7D3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpc5Q8C7D3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpc5Q8C7D3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.12■□□□□ 0.81
Pabpc5Q8C7D3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpc5Q8C7D3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pabpc5Q8C7D3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.12■□□□□ 0.81
Pabpc5Q8C7D3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.12■□□□□ 0.81
Pabpc5Q8C7D3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms