Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Col6a6Q8C6K9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Col6a6Q8C6K9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 Gm18671-201ENSMUST00000214826 683 ntBASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Col6a6Q8C6K9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col6a6Q8C6K9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col6a6Q8C6K9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col6a6Q8C6K9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col6a6Q8C6K9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.33■□□□□ 0.52
Col6a6Q8C6K9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col6a6Q8C6K9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col6a6Q8C6K9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col6a6Q8C6K9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col6a6Q8C6K9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Col6a6Q8C6K9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.33■□□□□ 0.52
Col6a6Q8C6K9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Col6a6Q8C6K9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Col6a6Q8C6K9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Col6a6Q8C6K9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Col6a6Q8C6K9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col6a6Q8C6K9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col6a6Q8C6K9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col6a6Q8C6K9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Col6a6Q8C6K9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col6a6Q8C6K9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col6a6Q8C6K9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.32■□□□□ 0.52
Col6a6Q8C6K9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col6a6Q8C6K9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col6a6Q8C6K9 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.31■□□□□ 0.52
Col6a6Q8C6K9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col6a6Q8C6K9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col6a6Q8C6K9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Col6a6Q8C6K9 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Col6a6Q8C6K9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a6Q8C6K9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a6Q8C6K9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a6Q8C6K9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a6Q8C6K9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a6Q8C6K9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a6Q8C6K9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a6Q8C6K9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a6Q8C6K9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Gm10602-201ENSMUST00000098239 609 ntBASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a6Q8C6K9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Col6a6Q8C6K9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col6a6Q8C6K9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col6a6Q8C6K9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col6a6Q8C6K9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col6a6Q8C6K9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Col6a6Q8C6K9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.27■□□□□ 0.52
Col6a6Q8C6K9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Col6a6Q8C6K9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col6a6Q8C6K9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a6Q8C6K9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a6Q8C6K9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a6Q8C6K9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms