Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.35■■□□□ 1.01
Brat1Q8C3R1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Brat1Q8C3R1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Brat1Q8C3R1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Brat1Q8C3R1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Brat1Q8C3R1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Brat1Q8C3R1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Brat1Q8C3R1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Brat1Q8C3R1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Brat1Q8C3R1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Brat1Q8C3R1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Brat1Q8C3R1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Brat1Q8C3R1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Brat1Q8C3R1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Brat1Q8C3R1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.34■■□□□ 1.01
Brat1Q8C3R1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Brat1Q8C3R1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.33■■□□□ 1.01
Brat1Q8C3R1 Gm27454-201ENSMUST00000185090 204 ntBASIC21.33■■□□□ 1.01
Brat1Q8C3R1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Brat1Q8C3R1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Brat1Q8C3R1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.33■■□□□ 1
Brat1Q8C3R1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Brat1Q8C3R1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1
Brat1Q8C3R1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Brat1Q8C3R1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Brat1Q8C3R1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Brat1Q8C3R1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.32■■□□□ 1
Brat1Q8C3R1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.32■■□□□ 1
Brat1Q8C3R1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.32■■□□□ 1
Brat1Q8C3R1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Brat1Q8C3R1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Brat1Q8C3R1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Brat1Q8C3R1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Brat1Q8C3R1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Brat1Q8C3R1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Brat1Q8C3R1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.31■■□□□ 1
Brat1Q8C3R1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Brat1Q8C3R1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.31■■□□□ 1
Brat1Q8C3R1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Brat1Q8C3R1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.3■■□□□ 1
Brat1Q8C3R1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brat1Q8C3R1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Brat1Q8C3R1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.3■■□□□ 1
Brat1Q8C3R1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brat1Q8C3R1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.3■■□□□ 1
Brat1Q8C3R1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.3■■□□□ 1
Brat1Q8C3R1 Gm43137-201ENSMUST00000198052 594 ntBASIC21.3■■□□□ 1
Brat1Q8C3R1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.3■■□□□ 1
Brat1Q8C3R1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.3■■□□□ 1
Brat1Q8C3R1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brat1Q8C3R1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brat1Q8C3R1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Brat1Q8C3R1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Brat1Q8C3R1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Brat1Q8C3R1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Brat1Q8C3R1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.29■■□□□ 1
Brat1Q8C3R1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Brat1Q8C3R1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brat1Q8C3R1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Brat1Q8C3R1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brat1Q8C3R1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.28■■□□□ 1
Brat1Q8C3R1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.28■■□□□ 1
Brat1Q8C3R1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.28■■□□□ 1
Brat1Q8C3R1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.28■■□□□ 1
Brat1Q8C3R1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brat1Q8C3R1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.28■■□□□ 1
Brat1Q8C3R1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Brat1Q8C3R1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Brat1Q8C3R1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Brat1Q8C3R1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Brat1Q8C3R1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Mir6236-201ENSMUST00000184437 123 ntBASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brat1Q8C3R1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Brat1Q8C3R1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Brat1Q8C3R1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Brat1Q8C3R1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Brat1Q8C3R1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brat1Q8C3R1 Gm45417-201ENSMUST00000209533 758 ntBASIC21.25■□□□□ 0.99
Brat1Q8C3R1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brat1Q8C3R1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Brat1Q8C3R1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms