Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf18Q8BM39 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf18Q8BM39 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.12■□□□□ 0.65
Prpf18Q8BM39 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.12■□□□□ 0.65
Prpf18Q8BM39 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.12■□□□□ 0.65
Prpf18Q8BM39 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.12■□□□□ 0.65
Prpf18Q8BM39 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf18Q8BM39 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf18Q8BM39 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.11■□□□□ 0.65
Prpf18Q8BM39 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf18Q8BM39 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf18Q8BM39 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.11■□□□□ 0.65
Prpf18Q8BM39 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf18Q8BM39 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf18Q8BM39 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf18Q8BM39 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Prpf18Q8BM39 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf18Q8BM39 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf18Q8BM39 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Prpf18Q8BM39 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf18Q8BM39 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.08■□□□□ 0.65
Prpf18Q8BM39 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf18Q8BM39 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Prpf18Q8BM39 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf18Q8BM39 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.08■□□□□ 0.64
Prpf18Q8BM39 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf18Q8BM39 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf18Q8BM39 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf18Q8BM39 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf18Q8BM39 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf18Q8BM39 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf18Q8BM39 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf18Q8BM39 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Prpf18Q8BM39 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf18Q8BM39 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf18Q8BM39 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Prpf18Q8BM39 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf18Q8BM39 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf18Q8BM39 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Prpf18Q8BM39 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.06■□□□□ 0.64
Prpf18Q8BM39 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf18Q8BM39 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf18Q8BM39 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.06■□□□□ 0.64
Prpf18Q8BM39 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Prpf18Q8BM39 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.05■□□□□ 0.64
Prpf18Q8BM39 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf18Q8BM39 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Prpf18Q8BM39 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf18Q8BM39 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf18Q8BM39 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Prpf18Q8BM39 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf18Q8BM39 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf18Q8BM39 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf18Q8BM39 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.04■□□□□ 0.64
Prpf18Q8BM39 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Prpf18Q8BM39 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf18Q8BM39 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf18Q8BM39 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.03■□□□□ 0.64
Prpf18Q8BM39 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms