Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.54■□□□□ 0.72
Rnf38Q8BI21 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf38Q8BI21 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf38Q8BI21 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Rnf38Q8BI21 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf38Q8BI21 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf38Q8BI21 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf38Q8BI21 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rnf38Q8BI21 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf38Q8BI21 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf38Q8BI21 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf38Q8BI21 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rnf38Q8BI21 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf38Q8BI21 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rnf38Q8BI21 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf38Q8BI21 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf38Q8BI21 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf38Q8BI21 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rnf38Q8BI21 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Rnf38Q8BI21 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rnf38Q8BI21 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf38Q8BI21 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf38Q8BI21 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf38Q8BI21 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf38Q8BI21 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf38Q8BI21 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf38Q8BI21 Gm43566-201ENSMUST00000196851 808 ntBASIC19.51■□□□□ 0.71
Rnf38Q8BI21 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.51■□□□□ 0.71
Rnf38Q8BI21 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf38Q8BI21 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf38Q8BI21 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf38Q8BI21 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf38Q8BI21 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf38Q8BI21 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf38Q8BI21 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rnf38Q8BI21 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.5■□□□□ 0.71
Rnf38Q8BI21 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf38Q8BI21 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf38Q8BI21 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf38Q8BI21 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf38Q8BI21 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rnf38Q8BI21 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf38Q8BI21 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf38Q8BI21 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf38Q8BI21 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.49■□□□□ 0.71
Rnf38Q8BI21 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf38Q8BI21 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Rnf38Q8BI21 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf38Q8BI21 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf38Q8BI21 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf38Q8BI21 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf38Q8BI21 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf38Q8BI21 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf38Q8BI21 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf38Q8BI21 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.48■□□□□ 0.71
Rnf38Q8BI21 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf38Q8BI21 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf38Q8BI21 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf38Q8BI21 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf38Q8BI21 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf38Q8BI21 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf38Q8BI21 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rnf38Q8BI21 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf38Q8BI21 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf38Q8BI21 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf38Q8BI21 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rnf38Q8BI21 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf38Q8BI21 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf38Q8BI21 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf38Q8BI21 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Rnf38Q8BI21 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf38Q8BI21 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.45■□□□□ 0.7
Rnf38Q8BI21 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf38Q8BI21 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf38Q8BI21 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf38Q8BI21 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf38Q8BI21 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf38Q8BI21 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rnf38Q8BI21 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf38Q8BI21 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf38Q8BI21 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.44■□□□□ 0.7
Rnf38Q8BI21 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf38Q8BI21 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf38Q8BI21 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf38Q8BI21 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Rnf38Q8BI21 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf38Q8BI21 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms