Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Clrn3Q8BHH8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.9■□□□□ 0.62
Clrn3Q8BHH8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn3Q8BHH8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn3Q8BHH8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn3Q8BHH8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn3Q8BHH8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn3Q8BHH8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn3Q8BHH8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Clrn3Q8BHH8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clrn3Q8BHH8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clrn3Q8BHH8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn3Q8BHH8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn3Q8BHH8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn3Q8BHH8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.89■□□□□ 0.61
Clrn3Q8BHH8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Clrn3Q8BHH8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn3Q8BHH8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn3Q8BHH8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn3Q8BHH8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clrn3Q8BHH8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn3Q8BHH8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn3Q8BHH8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn3Q8BHH8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn3Q8BHH8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn3Q8BHH8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Clrn3Q8BHH8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Clrn3Q8BHH8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn3Q8BHH8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clrn3Q8BHH8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn3Q8BHH8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.87■□□□□ 0.61
Clrn3Q8BHH8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Clrn3Q8BHH8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.87■□□□□ 0.61
Clrn3Q8BHH8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn3Q8BHH8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Clrn3Q8BHH8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn3Q8BHH8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn3Q8BHH8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Clrn3Q8BHH8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Gm7143-201ENSMUST00000222811 859 ntBASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn3Q8BHH8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn3Q8BHH8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn3Q8BHH8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.85■□□□□ 0.61
Clrn3Q8BHH8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn3Q8BHH8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Clrn3Q8BHH8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Clrn3Q8BHH8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn3Q8BHH8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn3Q8BHH8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn3Q8BHH8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn3Q8BHH8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
Clrn3Q8BHH8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Clrn3Q8BHH8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn3Q8BHH8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.84■□□□□ 0.61
Clrn3Q8BHH8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn3Q8BHH8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn3Q8BHH8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn3Q8BHH8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn3Q8BHH8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clrn3Q8BHH8 Gm14117-201ENSMUST00000122417 843 ntBASIC18.83■□□□□ 0.6
Clrn3Q8BHH8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.83■□□□□ 0.6
Clrn3Q8BHH8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Clrn3Q8BHH8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn3Q8BHH8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Clrn3Q8BHH8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.83■□□□□ 0.6
Clrn3Q8BHH8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn3Q8BHH8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn3Q8BHH8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn3Q8BHH8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn3Q8BHH8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn3Q8BHH8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn3Q8BHH8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Clrn3Q8BHH8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn3Q8BHH8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn3Q8BHH8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clrn3Q8BHH8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn3Q8BHH8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn3Q8BHH8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.81■□□□□ 0.6
Clrn3Q8BHH8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn3Q8BHH8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn3Q8BHH8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn3Q8BHH8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn3Q8BHH8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn3Q8BHH8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn3Q8BHH8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn3Q8BHH8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms