Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.64■■□□□ 1.37
Samm50Q8BGH2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.64■■□□□ 1.37
Samm50Q8BGH2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Samm50Q8BGH2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Samm50Q8BGH2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Samm50Q8BGH2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Samm50Q8BGH2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Samm50Q8BGH2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Samm50Q8BGH2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Samm50Q8BGH2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Samm50Q8BGH2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Samm50Q8BGH2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Samm50Q8BGH2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Samm50Q8BGH2 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.62■■□□□ 1.37
Samm50Q8BGH2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Samm50Q8BGH2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Samm50Q8BGH2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Samm50Q8BGH2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Samm50Q8BGH2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Samm50Q8BGH2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Samm50Q8BGH2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Samm50Q8BGH2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Samm50Q8BGH2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Samm50Q8BGH2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Samm50Q8BGH2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Samm50Q8BGH2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.61■■□□□ 1.37
Samm50Q8BGH2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Samm50Q8BGH2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Samm50Q8BGH2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Samm50Q8BGH2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Samm50Q8BGH2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Samm50Q8BGH2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Samm50Q8BGH2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Samm50Q8BGH2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Samm50Q8BGH2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Samm50Q8BGH2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Samm50Q8BGH2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Samm50Q8BGH2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Samm50Q8BGH2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Samm50Q8BGH2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Samm50Q8BGH2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Samm50Q8BGH2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Samm50Q8BGH2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.59■■□□□ 1.37
Samm50Q8BGH2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.59■■□□□ 1.37
Samm50Q8BGH2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Samm50Q8BGH2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Samm50Q8BGH2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Samm50Q8BGH2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Samm50Q8BGH2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Samm50Q8BGH2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Samm50Q8BGH2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Samm50Q8BGH2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Samm50Q8BGH2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Samm50Q8BGH2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Samm50Q8BGH2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.58■■□□□ 1.36
Samm50Q8BGH2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Samm50Q8BGH2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.57■■□□□ 1.36
Samm50Q8BGH2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Samm50Q8BGH2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Samm50Q8BGH2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Samm50Q8BGH2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.57■■□□□ 1.36
Samm50Q8BGH2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Samm50Q8BGH2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Samm50Q8BGH2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.57■■□□□ 1.36
Samm50Q8BGH2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Samm50Q8BGH2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Samm50Q8BGH2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Samm50Q8BGH2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Samm50Q8BGH2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Samm50Q8BGH2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Samm50Q8BGH2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.55■■□□□ 1.36
Samm50Q8BGH2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Samm50Q8BGH2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Samm50Q8BGH2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Samm50Q8BGH2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Samm50Q8BGH2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Samm50Q8BGH2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Samm50Q8BGH2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Samm50Q8BGH2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Samm50Q8BGH2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.54■■□□□ 1.36
Samm50Q8BGH2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.54■■□□□ 1.36
Samm50Q8BGH2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Samm50Q8BGH2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Samm50Q8BGH2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Samm50Q8BGH2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Samm50Q8BGH2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.53■■□□□ 1.36
Samm50Q8BGH2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Samm50Q8BGH2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms