Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim36Q80WG7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim36Q80WG7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Trim36Q80WG7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim36Q80WG7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim36Q80WG7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Trim36Q80WG7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim36Q80WG7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim36Q80WG7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim36Q80WG7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim36Q80WG7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim36Q80WG7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim36Q80WG7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Trim36Q80WG7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim36Q80WG7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim36Q80WG7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim36Q80WG7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim36Q80WG7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.39■□□□□ 0.69
Trim36Q80WG7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim36Q80WG7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim36Q80WG7 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.39■□□□□ 0.69
Trim36Q80WG7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim36Q80WG7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim36Q80WG7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim36Q80WG7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim36Q80WG7 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.38■□□□□ 0.69
Trim36Q80WG7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim36Q80WG7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim36Q80WG7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.38■□□□□ 0.69
Trim36Q80WG7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim36Q80WG7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim36Q80WG7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim36Q80WG7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim36Q80WG7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim36Q80WG7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim36Q80WG7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim36Q80WG7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.37■□□□□ 0.69
Trim36Q80WG7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim36Q80WG7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim36Q80WG7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim36Q80WG7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim36Q80WG7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim36Q80WG7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim36Q80WG7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Trim36Q80WG7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim36Q80WG7 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.36■□□□□ 0.69
Trim36Q80WG7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim36Q80WG7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim36Q80WG7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.36■□□□□ 0.69
Trim36Q80WG7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim36Q80WG7 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.36■□□□□ 0.69
Trim36Q80WG7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim36Q80WG7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim36Q80WG7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim36Q80WG7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim36Q80WG7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim36Q80WG7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim36Q80WG7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim36Q80WG7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim36Q80WG7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.35■□□□□ 0.69
Trim36Q80WG7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.35■□□□□ 0.69
Trim36Q80WG7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim36Q80WG7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim36Q80WG7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim36Q80WG7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim36Q80WG7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim36Q80WG7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim36Q80WG7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim36Q80WG7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim36Q80WG7 Gm15039-201ENSMUST00000118914 875 ntBASIC19.34■□□□□ 0.69
Trim36Q80WG7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim36Q80WG7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim36Q80WG7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim36Q80WG7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim36Q80WG7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim36Q80WG7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim36Q80WG7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim36Q80WG7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim36Q80WG7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim36Q80WG7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim36Q80WG7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim36Q80WG7 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.33■□□□□ 0.68
Trim36Q80WG7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.33■□□□□ 0.68
Trim36Q80WG7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Trim36Q80WG7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim36Q80WG7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim36Q80WG7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim36Q80WG7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Trim36Q80WG7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim36Q80WG7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim36Q80WG7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Trim36Q80WG7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim36Q80WG7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms