Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ubr5Q80TP3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubr5Q80TP3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Ubr5Q80TP3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ubr5Q80TP3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.95■□□□□ 0.46
Ubr5Q80TP3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr5Q80TP3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr5Q80TP3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.95■□□□□ 0.46
Ubr5Q80TP3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr5Q80TP3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr5Q80TP3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.95■□□□□ 0.46
Ubr5Q80TP3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr5Q80TP3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr5Q80TP3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr5Q80TP3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.93■□□□□ 0.46
Ubr5Q80TP3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ubr5Q80TP3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr5Q80TP3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ubr5Q80TP3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr5Q80TP3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ubr5Q80TP3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ubr5Q80TP3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.93■□□□□ 0.46
Ubr5Q80TP3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ubr5Q80TP3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr5Q80TP3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr5Q80TP3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr5Q80TP3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr5Q80TP3 Gm20049-201ENSMUST00000219950 730 ntBASIC17.92■□□□□ 0.46
Ubr5Q80TP3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ubr5Q80TP3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr5Q80TP3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr5Q80TP3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ubr5Q80TP3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr5Q80TP3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr5Q80TP3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr5Q80TP3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr5Q80TP3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr5Q80TP3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr5Q80TP3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr5Q80TP3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr5Q80TP3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr5Q80TP3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr5Q80TP3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr5Q80TP3 Gm27801-201ENSMUST00000184174 223 ntBASIC17.91■□□□□ 0.46
Ubr5Q80TP3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.9■□□□□ 0.46
Ubr5Q80TP3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ubr5Q80TP3 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.9■□□□□ 0.46
Ubr5Q80TP3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ubr5Q80TP3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ubr5Q80TP3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ubr5Q80TP3 Gm37856-201ENSMUST00000191634 999 ntBASIC17.9■□□□□ 0.46
Ubr5Q80TP3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ubr5Q80TP3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ubr5Q80TP3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ubr5Q80TP3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ubr5Q80TP3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ubr5Q80TP3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ubr5Q80TP3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ubr5Q80TP3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ubr5Q80TP3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ubr5Q80TP3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ubr5Q80TP3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ubr5Q80TP3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ubr5Q80TP3 Gm7514-201ENSMUST00000209475 934 ntBASIC17.88■□□□□ 0.45
Ubr5Q80TP3 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.88■□□□□ 0.45
Ubr5Q80TP3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ubr5Q80TP3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ubr5Q80TP3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ubr5Q80TP3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ubr5Q80TP3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ubr5Q80TP3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.87■□□□□ 0.45
Ubr5Q80TP3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ubr5Q80TP3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ubr5Q80TP3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.87■□□□□ 0.45
Ubr5Q80TP3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ubr5Q80TP3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ubr5Q80TP3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ubr5Q80TP3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr5Q80TP3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr5Q80TP3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ubr5Q80TP3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ubr5Q80TP3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.86■□□□□ 0.45
Ubr5Q80TP3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr5Q80TP3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr5Q80TP3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.85■□□□□ 0.45
Ubr5Q80TP3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr5Q80TP3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubr5Q80TP3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms