Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx4Q7TNK1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx4Q7TNK1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx4Q7TNK1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx4Q7TNK1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx4Q7TNK1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.37■□□□□ 0.69
Rfx4Q7TNK1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.37■□□□□ 0.69
Rfx4Q7TNK1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx4Q7TNK1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx4Q7TNK1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx4Q7TNK1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx4Q7TNK1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.36■□□□□ 0.69
Rfx4Q7TNK1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx4Q7TNK1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx4Q7TNK1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.36■□□□□ 0.69
Rfx4Q7TNK1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx4Q7TNK1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx4Q7TNK1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx4Q7TNK1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx4Q7TNK1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx4Q7TNK1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx4Q7TNK1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.35■□□□□ 0.69
Rfx4Q7TNK1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx4Q7TNK1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx4Q7TNK1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rfx4Q7TNK1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.35■□□□□ 0.69
Rfx4Q7TNK1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx4Q7TNK1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx4Q7TNK1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx4Q7TNK1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx4Q7TNK1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rfx4Q7TNK1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx4Q7TNK1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx4Q7TNK1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx4Q7TNK1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.33■□□□□ 0.69
Rfx4Q7TNK1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.33■□□□□ 0.69
Rfx4Q7TNK1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx4Q7TNK1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx4Q7TNK1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx4Q7TNK1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
Rfx4Q7TNK1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx4Q7TNK1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.32■□□□□ 0.68
Rfx4Q7TNK1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx4Q7TNK1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx4Q7TNK1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx4Q7TNK1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx4Q7TNK1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx4Q7TNK1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx4Q7TNK1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx4Q7TNK1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.31■□□□□ 0.68
Rfx4Q7TNK1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx4Q7TNK1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx4Q7TNK1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.31■□□□□ 0.68
Rfx4Q7TNK1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx4Q7TNK1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rfx4Q7TNK1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rfx4Q7TNK1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx4Q7TNK1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rfx4Q7TNK1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rfx4Q7TNK1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.29■□□□□ 0.68
Rfx4Q7TNK1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx4Q7TNK1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx4Q7TNK1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx4Q7TNK1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Rfx4Q7TNK1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx4Q7TNK1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx4Q7TNK1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx4Q7TNK1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Rfx4Q7TNK1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx4Q7TNK1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rfx4Q7TNK1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx4Q7TNK1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx4Q7TNK1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx4Q7TNK1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx4Q7TNK1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.27■□□□□ 0.68
Rfx4Q7TNK1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx4Q7TNK1 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.27■□□□□ 0.68
Rfx4Q7TNK1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Rfx4Q7TNK1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rfx4Q7TNK1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.26■□□□□ 0.67
Rfx4Q7TNK1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.26■□□□□ 0.67
Rfx4Q7TNK1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx4Q7TNK1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx4Q7TNK1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rfx4Q7TNK1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx4Q7TNK1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms