Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Kdm1aQ6ZQ88 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Kdm1aQ6ZQ88 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm1aQ6ZQ88 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm1aQ6ZQ88 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm1aQ6ZQ88 Gm15820-201ENSMUST00000201566 728 ntBASIC22.38■■□□□ 1.17
Kdm1aQ6ZQ88 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm1aQ6ZQ88 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm1aQ6ZQ88 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm1aQ6ZQ88 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm1aQ6ZQ88 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm1aQ6ZQ88 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm1aQ6ZQ88 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.37■■□□□ 1.17
Kdm1aQ6ZQ88 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Kdm1aQ6ZQ88 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Kdm1aQ6ZQ88 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Kdm1aQ6ZQ88 Gm7143-201ENSMUST00000222811 859 ntBASIC22.37■■□□□ 1.17
Kdm1aQ6ZQ88 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Kdm1aQ6ZQ88 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Kdm1aQ6ZQ88 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kdm1aQ6ZQ88 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Kdm1aQ6ZQ88 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kdm1aQ6ZQ88 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.36■■□□□ 1.17
Kdm1aQ6ZQ88 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kdm1aQ6ZQ88 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Kdm1aQ6ZQ88 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.36■■□□□ 1.17
Kdm1aQ6ZQ88 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.36■■□□□ 1.17
Kdm1aQ6ZQ88 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.36■■□□□ 1.17
Kdm1aQ6ZQ88 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Kdm1aQ6ZQ88 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kdm1aQ6ZQ88 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Kdm1aQ6ZQ88 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Gm5812-201ENSMUST00000061073 957 ntBASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm1aQ6ZQ88 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm1aQ6ZQ88 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm1aQ6ZQ88 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm1aQ6ZQ88 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.34■■□□□ 1.17
Kdm1aQ6ZQ88 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm1aQ6ZQ88 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm1aQ6ZQ88 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm1aQ6ZQ88 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm1aQ6ZQ88 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm1aQ6ZQ88 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm1aQ6ZQ88 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.17
Kdm1aQ6ZQ88 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Kdm1aQ6ZQ88 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Kdm1aQ6ZQ88 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Kdm1aQ6ZQ88 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Kdm1aQ6ZQ88 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm1aQ6ZQ88 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm1aQ6ZQ88 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Kdm1aQ6ZQ88 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm1aQ6ZQ88 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.32■■□□□ 1.16
Kdm1aQ6ZQ88 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm1aQ6ZQ88 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.32■■□□□ 1.16
Kdm1aQ6ZQ88 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Kdm1aQ6ZQ88 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm1aQ6ZQ88 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Kdm1aQ6ZQ88 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Kdm1aQ6ZQ88 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm1aQ6ZQ88 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm1aQ6ZQ88 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm1aQ6ZQ88 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm1aQ6ZQ88 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm1aQ6ZQ88 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm1aQ6ZQ88 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Kdm1aQ6ZQ88 Notumos-201ENSMUST00000151998 2659 ntBASIC22.31■■□□□ 1.16
Kdm1aQ6ZQ88 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Kdm1aQ6ZQ88 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm1aQ6ZQ88 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm1aQ6ZQ88 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Kdm1aQ6ZQ88 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.3■■□□□ 1.16
Kdm1aQ6ZQ88 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.3■■□□□ 1.16
Kdm1aQ6ZQ88 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm1aQ6ZQ88 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm1aQ6ZQ88 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Kdm1aQ6ZQ88 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC22.29■■□□□ 1.16
Kdm1aQ6ZQ88 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm1aQ6ZQ88 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Kdm1aQ6ZQ88 Gm15546-201ENSMUST00000122095 826 ntBASIC22.28■■□□□ 1.16
Kdm1aQ6ZQ88 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms