Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.52■■□□□ 1.36
Scn10aQ6QIY3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Scn10aQ6QIY3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Scn10aQ6QIY3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Scn10aQ6QIY3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Scn10aQ6QIY3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Scn10aQ6QIY3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
Scn10aQ6QIY3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Scn10aQ6QIY3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Scn10aQ6QIY3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Scn10aQ6QIY3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Scn10aQ6QIY3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC23.5■■□□□ 1.35
Scn10aQ6QIY3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.5■■□□□ 1.35
Scn10aQ6QIY3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC23.5■■□□□ 1.35
Scn10aQ6QIY3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Scn10aQ6QIY3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Scn10aQ6QIY3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Scn10aQ6QIY3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC23.49■■□□□ 1.35
Scn10aQ6QIY3 Gm42778-201ENSMUST00000199644 553 ntBASIC23.49■■□□□ 1.35
Scn10aQ6QIY3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.49■■□□□ 1.35
Scn10aQ6QIY3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Scn10aQ6QIY3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Scn10aQ6QIY3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Scn10aQ6QIY3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.49■■□□□ 1.35
Scn10aQ6QIY3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Scn10aQ6QIY3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Scn10aQ6QIY3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Scn10aQ6QIY3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Scn10aQ6QIY3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Scn10aQ6QIY3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Scn10aQ6QIY3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Scn10aQ6QIY3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Scn10aQ6QIY3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Scn10aQ6QIY3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Scn10aQ6QIY3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Scn10aQ6QIY3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Scn10aQ6QIY3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Scn10aQ6QIY3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Scn10aQ6QIY3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Scn10aQ6QIY3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Scn10aQ6QIY3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Scn10aQ6QIY3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Scn10aQ6QIY3 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.46■■□□□ 1.35
Scn10aQ6QIY3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23.45■■□□□ 1.35
Scn10aQ6QIY3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.45■■□□□ 1.35
Scn10aQ6QIY3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Scn10aQ6QIY3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Scn10aQ6QIY3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Scn10aQ6QIY3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC23.45■■□□□ 1.34
Scn10aQ6QIY3 Ap3s1-204ENSMUST00000225520 957 ntBASIC23.45■■□□□ 1.34
Scn10aQ6QIY3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Scn10aQ6QIY3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Scn10aQ6QIY3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Scn10aQ6QIY3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Scn10aQ6QIY3 Gm13234-201ENSMUST00000120010 747 ntBASIC23.44■■□□□ 1.34
Scn10aQ6QIY3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.44■■□□□ 1.34
Scn10aQ6QIY3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.43■■□□□ 1.34
Scn10aQ6QIY3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Scn10aQ6QIY3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC23.43■■□□□ 1.34
Scn10aQ6QIY3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.43■■□□□ 1.34
Scn10aQ6QIY3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Scn10aQ6QIY3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Scn10aQ6QIY3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Scn10aQ6QIY3 Gm27801-201ENSMUST00000184174 223 ntBASIC23.42■■□□□ 1.34
Scn10aQ6QIY3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.42■■□□□ 1.34
Scn10aQ6QIY3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
Scn10aQ6QIY3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Scn10aQ6QIY3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC23.42■■□□□ 1.34
Scn10aQ6QIY3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Scn10aQ6QIY3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Scn10aQ6QIY3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Scn10aQ6QIY3 Reep4-203ENSMUST00000226563 1444 ntBASIC23.42■■□□□ 1.34
Scn10aQ6QIY3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Scn10aQ6QIY3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Scn10aQ6QIY3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
Scn10aQ6QIY3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Scn10aQ6QIY3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Scn10aQ6QIY3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23.41■■□□□ 1.34
Scn10aQ6QIY3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Scn10aQ6QIY3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scn10aQ6QIY3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scn10aQ6QIY3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scn10aQ6QIY3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scn10aQ6QIY3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scn10aQ6QIY3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scn10aQ6QIY3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Scn10aQ6QIY3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC23.39■■□□□ 1.34
Scn10aQ6QIY3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
Scn10aQ6QIY3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Scn10aQ6QIY3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.39■■□□□ 1.33
Scn10aQ6QIY3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Scn10aQ6QIY3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Scn10aQ6QIY3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scn10aQ6QIY3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Scn10aQ6QIY3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Scn10aQ6QIY3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scn10aQ6QIY3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scn10aQ6QIY3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scn10aQ6QIY3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Scn10aQ6QIY3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms