Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Scube1Q6NZL8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scube1Q6NZL8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scube1Q6NZL8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Scube1Q6NZL8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scube1Q6NZL8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scube1Q6NZL8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scube1Q6NZL8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scube1Q6NZL8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scube1Q6NZL8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scube1Q6NZL8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scube1Q6NZL8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scube1Q6NZL8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scube1Q6NZL8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scube1Q6NZL8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scube1Q6NZL8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scube1Q6NZL8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scube1Q6NZL8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scube1Q6NZL8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scube1Q6NZL8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scube1Q6NZL8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube1Q6NZL8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube1Q6NZL8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube1Q6NZL8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube1Q6NZL8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube1Q6NZL8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube1Q6NZL8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scube1Q6NZL8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scube1Q6NZL8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scube1Q6NZL8 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.33■□□□□ 0.69
Scube1Q6NZL8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scube1Q6NZL8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scube1Q6NZL8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scube1Q6NZL8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scube1Q6NZL8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Scube1Q6NZL8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Scube1Q6NZL8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube1Q6NZL8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube1Q6NZL8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube1Q6NZL8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube1Q6NZL8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube1Q6NZL8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube1Q6NZL8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scube1Q6NZL8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube1Q6NZL8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube1Q6NZL8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube1Q6NZL8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube1Q6NZL8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube1Q6NZL8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube1Q6NZL8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube1Q6NZL8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube1Q6NZL8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Scube1Q6NZL8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Scube1Q6NZL8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Scube1Q6NZL8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scube1Q6NZL8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scube1Q6NZL8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scube1Q6NZL8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scube1Q6NZL8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scube1Q6NZL8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.29■□□□□ 0.68
Scube1Q6NZL8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube1Q6NZL8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scube1Q6NZL8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scube1Q6NZL8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scube1Q6NZL8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scube1Q6NZL8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.27■□□□□ 0.68
Scube1Q6NZL8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scube1Q6NZL8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scube1Q6NZL8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scube1Q6NZL8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scube1Q6NZL8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.26■□□□□ 0.67
Scube1Q6NZL8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scube1Q6NZL8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms