Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.86■□□□□ 0.77
VclQ64727 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.86■□□□□ 0.77
VclQ64727 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
VclQ64727 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VclQ64727 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VclQ64727 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VclQ64727 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
VclQ64727 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VclQ64727 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VclQ64727 Gm43530-201ENSMUST00000195920 274 ntBASIC19.85■□□□□ 0.77
VclQ64727 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VclQ64727 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VclQ64727 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VclQ64727 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VclQ64727 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VclQ64727 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VclQ64727 Gm21956-201ENSMUST00000179946 522 ntBASIC19.84■□□□□ 0.77
VclQ64727 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VclQ64727 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.84■□□□□ 0.77
VclQ64727 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VclQ64727 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
VclQ64727 Gm12821-201ENSMUST00000120022 600 ntBASIC19.83■□□□□ 0.77
VclQ64727 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VclQ64727 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VclQ64727 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VclQ64727 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VclQ64727 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.82■□□□□ 0.76
VclQ64727 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VclQ64727 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.82■□□□□ 0.76
VclQ64727 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VclQ64727 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VclQ64727 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VclQ64727 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VclQ64727 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VclQ64727 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.81■□□□□ 0.76
VclQ64727 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VclQ64727 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VclQ64727 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.81■□□□□ 0.76
VclQ64727 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VclQ64727 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VclQ64727 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VclQ64727 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VclQ64727 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.8■□□□□ 0.76
VclQ64727 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VclQ64727 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VclQ64727 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.8■□□□□ 0.76
VclQ64727 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VclQ64727 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VclQ64727 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VclQ64727 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VclQ64727 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VclQ64727 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VclQ64727 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VclQ64727 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VclQ64727 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
VclQ64727 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VclQ64727 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VclQ64727 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VclQ64727 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VclQ64727 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VclQ64727 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.77■□□□□ 0.76
VclQ64727 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VclQ64727 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VclQ64727 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VclQ64727 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
VclQ64727 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.77■□□□□ 0.76
VclQ64727 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VclQ64727 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.77■□□□□ 0.76
VclQ64727 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.77■□□□□ 0.76
VclQ64727 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VclQ64727 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
VclQ64727 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.77■□□□□ 0.76
VclQ64727 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VclQ64727 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
VclQ64727 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.76■□□□□ 0.75
VclQ64727 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VclQ64727 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VclQ64727 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VclQ64727 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VclQ64727 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VclQ64727 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VclQ64727 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VclQ64727 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VclQ64727 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VclQ64727 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.76■□□□□ 0.75
VclQ64727 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
VclQ64727 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VclQ64727 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms