Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ptp4a1Q63739 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptp4a1Q63739 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptp4a1Q63739 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ptp4a1Q63739 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ptp4a1Q63739 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptp4a1Q63739 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptp4a1Q63739 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptp4a1Q63739 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptp4a1Q63739 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Ptp4a1Q63739 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ptp4a1Q63739 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptp4a1Q63739 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ptp4a1Q63739 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptp4a1Q63739 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ptp4a1Q63739 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ptp4a1Q63739 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptp4a1Q63739 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptp4a1Q63739 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptp4a1Q63739 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ptp4a1Q63739 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ptp4a1Q63739 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptp4a1Q63739 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.17■□□□□ 0.5
Ptp4a1Q63739 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptp4a1Q63739 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptp4a1Q63739 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptp4a1Q63739 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.17■□□□□ 0.5
Ptp4a1Q63739 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptp4a1Q63739 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ptp4a1Q63739 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.17■□□□□ 0.5
Ptp4a1Q63739 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ptp4a1Q63739 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ptp4a1Q63739 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptp4a1Q63739 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptp4a1Q63739 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptp4a1Q63739 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptp4a1Q63739 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptp4a1Q63739 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ptp4a1Q63739 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ptp4a1Q63739 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptp4a1Q63739 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptp4a1Q63739 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ptp4a1Q63739 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ptp4a1Q63739 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ptp4a1Q63739 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptp4a1Q63739 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptp4a1Q63739 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptp4a1Q63739 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptp4a1Q63739 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ptp4a1Q63739 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ptp4a1Q63739 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.15■□□□□ 0.5
Ptp4a1Q63739 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptp4a1Q63739 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ptp4a1Q63739 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ptp4a1Q63739 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ptp4a1Q63739 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ptp4a1Q63739 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ptp4a1Q63739 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ptp4a1Q63739 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ptp4a1Q63739 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ptp4a1Q63739 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptp4a1Q63739 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptp4a1Q63739 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.14■□□□□ 0.49
Ptp4a1Q63739 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ptp4a1Q63739 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptp4a1Q63739 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptp4a1Q63739 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptp4a1Q63739 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ptp4a1Q63739 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.13■□□□□ 0.49
Ptp4a1Q63739 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ptp4a1Q63739 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ptp4a1Q63739 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.13■□□□□ 0.49
Ptp4a1Q63739 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ptp4a1Q63739 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Ptp4a1Q63739 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptp4a1Q63739 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptp4a1Q63739 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ptp4a1Q63739 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptp4a1Q63739 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptp4a1Q63739 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptp4a1Q63739 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ptp4a1Q63739 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
Ptp4a1Q63739 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.12■□□□□ 0.49
Ptp4a1Q63739 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptp4a1Q63739 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ptp4a1Q63739 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms