Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Six3Q62233 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six3Q62233 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Six3Q62233 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.77■□□□□ 0.76
Six3Q62233 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six3Q62233 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six3Q62233 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Six3Q62233 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six3Q62233 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Six3Q62233 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Six3Q62233 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.77■□□□□ 0.76
Six3Q62233 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six3Q62233 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.77■□□□□ 0.76
Six3Q62233 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six3Q62233 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Six3Q62233 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six3Q62233 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six3Q62233 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six3Q62233 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six3Q62233 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.76■□□□□ 0.75
Six3Q62233 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.76■□□□□ 0.75
Six3Q62233 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Six3Q62233 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six3Q62233 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six3Q62233 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six3Q62233 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Six3Q62233 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Six3Q62233 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six3Q62233 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six3Q62233 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six3Q62233 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Six3Q62233 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.75■□□□□ 0.75
Six3Q62233 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.75■□□□□ 0.75
Six3Q62233 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six3Q62233 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Six3Q62233 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six3Q62233 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six3Q62233 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Six3Q62233 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.75■□□□□ 0.75
Six3Q62233 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.75■□□□□ 0.75
Six3Q62233 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Six3Q62233 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six3Q62233 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six3Q62233 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six3Q62233 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six3Q62233 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six3Q62233 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six3Q62233 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.74■□□□□ 0.75
Six3Q62233 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six3Q62233 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six3Q62233 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Six3Q62233 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.73■□□□□ 0.75
Six3Q62233 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.73■□□□□ 0.75
Six3Q62233 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Six3Q62233 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Six3Q62233 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six3Q62233 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Six3Q62233 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Six3Q62233 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six3Q62233 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six3Q62233 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six3Q62233 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six3Q62233 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.72■□□□□ 0.75
Six3Q62233 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six3Q62233 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six3Q62233 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Six3Q62233 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Six3Q62233 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.71■□□□□ 0.75
Six3Q62233 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Six3Q62233 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.71■□□□□ 0.75
Six3Q62233 Gm40881-201ENSMUST00000223397 166 ntBASIC19.71■□□□□ 0.75
Six3Q62233 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six3Q62233 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Six3Q62233 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Six3Q62233 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Six3Q62233 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six3Q62233 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six3Q62233 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six3Q62233 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six3Q62233 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.7■□□□□ 0.74
Six3Q62233 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Six3Q62233 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Six3Q62233 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Six3Q62233 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six3Q62233 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six3Q62233 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six3Q62233 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six3Q62233 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Six3Q62233 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six3Q62233 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six3Q62233 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.69■□□□□ 0.74
Six3Q62233 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Six3Q62233 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six3Q62233 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Six3Q62233 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Six3Q62233 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six3Q62233 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six3Q62233 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six3Q62233 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six3Q62233 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms