Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Six2Q62232 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six2Q62232 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Six2Q62232 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.67■■□□□ 1.06
Six2Q62232 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Six2Q62232 Gm9870-201ENSMUST00000063874 645 ntBASIC21.67■■□□□ 1.06
Six2Q62232 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Six2Q62232 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Six2Q62232 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.66■■□□□ 1.06
Six2Q62232 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.66■■□□□ 1.06
Six2Q62232 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.66■■□□□ 1.06
Six2Q62232 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Six2Q62232 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Six2Q62232 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six2Q62232 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Six2Q62232 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Six2Q62232 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Six2Q62232 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Six2Q62232 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Six2Q62232 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Six2Q62232 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Six2Q62232 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Six2Q62232 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Six2Q62232 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six2Q62232 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Six2Q62232 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Six2Q62232 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six2Q62232 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.64■■□□□ 1.05
Six2Q62232 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six2Q62232 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Six2Q62232 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.64■■□□□ 1.05
Six2Q62232 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six2Q62232 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six2Q62232 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six2Q62232 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six2Q62232 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six2Q62232 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.63■■□□□ 1.05
Six2Q62232 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Six2Q62232 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six2Q62232 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six2Q62232 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six2Q62232 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six2Q62232 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Six2Q62232 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six2Q62232 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six2Q62232 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Six2Q62232 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.62■■□□□ 1.05
Six2Q62232 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
Six2Q62232 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.62■■□□□ 1.05
Six2Q62232 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six2Q62232 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six2Q62232 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.62■■□□□ 1.05
Six2Q62232 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six2Q62232 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six2Q62232 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Six2Q62232 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six2Q62232 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six2Q62232 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six2Q62232 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.61■■□□□ 1.05
Six2Q62232 Gm22238-201ENSMUST00000175222 88 ntBASIC21.61■■□□□ 1.05
Six2Q62232 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six2Q62232 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.61■■□□□ 1.05
Six2Q62232 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six2Q62232 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Six2Q62232 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six2Q62232 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six2Q62232 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Six2Q62232 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six2Q62232 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Six2Q62232 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.6■■□□□ 1.05
Six2Q62232 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.6■■□□□ 1.05
Six2Q62232 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.6■■□□□ 1.05
Six2Q62232 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Six2Q62232 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Six2Q62232 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Six2Q62232 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six2Q62232 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Six2Q62232 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six2Q62232 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.59■■□□□ 1.05
Six2Q62232 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six2Q62232 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six2Q62232 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
Six2Q62232 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Six2Q62232 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Six2Q62232 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Six2Q62232 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Six2Q62232 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Six2Q62232 Gm45102-201ENSMUST00000207427 857 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms