Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim21Q62191 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim21Q62191 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim21Q62191 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim21Q62191 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim21Q62191 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Trim21Q62191 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim21Q62191 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim21Q62191 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim21Q62191 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim21Q62191 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Trim21Q62191 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim21Q62191 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.27■■□□□ 1
Trim21Q62191 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trim21Q62191 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trim21Q62191 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Trim21Q62191 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim21Q62191 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim21Q62191 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim21Q62191 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim21Q62191 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim21Q62191 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim21Q62191 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim21Q62191 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim21Q62191 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim21Q62191 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim21Q62191 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim21Q62191 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim21Q62191 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim21Q62191 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim21Q62191 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.25■□□□□ 0.99
Trim21Q62191 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim21Q62191 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim21Q62191 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim21Q62191 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim21Q62191 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim21Q62191 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim21Q62191 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim21Q62191 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim21Q62191 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim21Q62191 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trim21Q62191 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim21Q62191 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim21Q62191 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Trim21Q62191 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.23■□□□□ 0.99
Trim21Q62191 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim21Q62191 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim21Q62191 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim21Q62191 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim21Q62191 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.23■□□□□ 0.99
Trim21Q62191 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trim21Q62191 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim21Q62191 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim21Q62191 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim21Q62191 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim21Q62191 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim21Q62191 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim21Q62191 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim21Q62191 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim21Q62191 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim21Q62191 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim21Q62191 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim21Q62191 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.22■□□□□ 0.99
Trim21Q62191 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.22■□□□□ 0.99
Trim21Q62191 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.22■□□□□ 0.99
Trim21Q62191 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim21Q62191 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim21Q62191 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim21Q62191 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim21Q62191 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim21Q62191 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim21Q62191 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim21Q62191 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.21■□□□□ 0.99
Trim21Q62191 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim21Q62191 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim21Q62191 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim21Q62191 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim21Q62191 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim21Q62191 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim21Q62191 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim21Q62191 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Trim21Q62191 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.2■□□□□ 0.98
Trim21Q62191 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.2■□□□□ 0.98
Trim21Q62191 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim21Q62191 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim21Q62191 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim21Q62191 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Trim21Q62191 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim21Q62191 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim21Q62191 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim21Q62191 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim21Q62191 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim21Q62191 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim21Q62191 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim21Q62191 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim21Q62191 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.19■□□□□ 0.98
Trim21Q62191 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.19■□□□□ 0.98
Trim21Q62191 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim21Q62191 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim21Q62191 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms