Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Ddx4Q61496 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx4Q61496 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ddx4Q61496 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx4Q61496 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx4Q61496 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx4Q61496 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx4Q61496 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx4Q61496 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx4Q61496 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx4Q61496 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx4Q61496 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx4Q61496 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ddx4Q61496 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
Ddx4Q61496 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.44■■□□□ 1.18
Ddx4Q61496 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.44■■□□□ 1.18
Ddx4Q61496 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.44■■□□□ 1.18
Ddx4Q61496 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.44■■□□□ 1.18
Ddx4Q61496 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ddx4Q61496 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.43■■□□□ 1.18
Ddx4Q61496 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.43■■□□□ 1.18
Ddx4Q61496 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx4Q61496 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx4Q61496 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx4Q61496 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx4Q61496 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.42■■□□□ 1.18
Ddx4Q61496 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC22.42■■□□□ 1.18
Ddx4Q61496 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx4Q61496 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx4Q61496 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx4Q61496 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.41■■□□□ 1.18
Ddx4Q61496 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Ddx4Q61496 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx4Q61496 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.41■■□□□ 1.18
Ddx4Q61496 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx4Q61496 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx4Q61496 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx4Q61496 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx4Q61496 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx4Q61496 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx4Q61496 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx4Q61496 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Ddx4Q61496 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.39■■□□□ 1.18
Ddx4Q61496 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.39■■□□□ 1.18
Ddx4Q61496 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx4Q61496 Gm12933-201ENSMUST00000120203 872 ntBASIC22.39■■□□□ 1.17
Ddx4Q61496 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx4Q61496 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Ddx4Q61496 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.39■■□□□ 1.17
Ddx4Q61496 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx4Q61496 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx4Q61496 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ddx4Q61496 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx4Q61496 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx4Q61496 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx4Q61496 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Ddx4Q61496 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx4Q61496 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx4Q61496 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC22.37■■□□□ 1.17
Ddx4Q61496 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx4Q61496 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx4Q61496 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx4Q61496 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.36■■□□□ 1.17
Ddx4Q61496 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx4Q61496 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx4Q61496 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx4Q61496 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx4Q61496 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx4Q61496 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx4Q61496 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.35■■□□□ 1.17
Ddx4Q61496 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx4Q61496 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx4Q61496 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx4Q61496 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx4Q61496 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.34■■□□□ 1.17
Ddx4Q61496 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx4Q61496 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.34■■□□□ 1.17
Ddx4Q61496 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.34■■□□□ 1.17
Ddx4Q61496 Gm9988-201ENSMUST00000069786 435 ntBASIC22.34■■□□□ 1.17
Ddx4Q61496 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx4Q61496 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx4Q61496 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.33■■□□□ 1.17
Ddx4Q61496 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx4Q61496 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx4Q61496 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.33■■□□□ 1.17
Ddx4Q61496 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.33■■□□□ 1.17
Ddx4Q61496 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.33■■□□□ 1.17
Ddx4Q61496 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms