Protein–RNA interactions for Protein: Q61481

Pde1a, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde1aQ61481 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde1aQ61481 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pde1aQ61481 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde1aQ61481 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde1aQ61481 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde1aQ61481 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde1aQ61481 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde1aQ61481 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.7■□□□□ 0.9
Pde1aQ61481 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde1aQ61481 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Pde1aQ61481 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde1aQ61481 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde1aQ61481 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde1aQ61481 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde1aQ61481 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pde1aQ61481 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.69■□□□□ 0.9
Pde1aQ61481 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pde1aQ61481 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde1aQ61481 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde1aQ61481 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.69■□□□□ 0.9
Pde1aQ61481 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.69■□□□□ 0.9
Pde1aQ61481 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde1aQ61481 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pde1aQ61481 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde1aQ61481 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.69■□□□□ 0.9
Pde1aQ61481 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.69■□□□□ 0.9
Pde1aQ61481 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pde1aQ61481 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pde1aQ61481 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.69■□□□□ 0.9
Pde1aQ61481 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde1aQ61481 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde1aQ61481 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde1aQ61481 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde1aQ61481 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.68■□□□□ 0.9
Pde1aQ61481 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pde1aQ61481 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde1aQ61481 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde1aQ61481 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde1aQ61481 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde1aQ61481 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pde1aQ61481 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pde1aQ61481 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pde1aQ61481 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde1aQ61481 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde1aQ61481 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pde1aQ61481 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pde1aQ61481 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Pde1aQ61481 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde1aQ61481 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pde1aQ61481 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.66■□□□□ 0.9
Pde1aQ61481 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.66■□□□□ 0.9
Pde1aQ61481 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde1aQ61481 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde1aQ61481 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pde1aQ61481 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde1aQ61481 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pde1aQ61481 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.66■□□□□ 0.9
Pde1aQ61481 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.66■□□□□ 0.9
Pde1aQ61481 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde1aQ61481 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pde1aQ61481 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde1aQ61481 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde1aQ61481 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde1aQ61481 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pde1aQ61481 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pde1aQ61481 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde1aQ61481 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pde1aQ61481 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pde1aQ61481 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pde1aQ61481 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.64■□□□□ 0.89
Pde1aQ61481 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.64■□□□□ 0.89
Pde1aQ61481 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.64■□□□□ 0.89
Pde1aQ61481 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pde1aQ61481 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pde1aQ61481 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pde1aQ61481 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde1aQ61481 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde1aQ61481 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.63■□□□□ 0.89
Pde1aQ61481 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde1aQ61481 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde1aQ61481 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde1aQ61481 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde1aQ61481 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde1aQ61481 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde1aQ61481 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde1aQ61481 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pde1aQ61481 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.61■□□□□ 0.89
Pde1aQ61481 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.61■□□□□ 0.89
Pde1aQ61481 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pde1aQ61481 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde1aQ61481 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde1aQ61481 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.6■□□□□ 0.89
Pde1aQ61481 Gm43137-201ENSMUST00000198052 594 ntBASIC20.6■□□□□ 0.89
Pde1aQ61481 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pde1aQ61481 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde1aQ61481 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pde1aQ61481 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Pde1aQ61481 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pde1aQ61481 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pde1aQ61481 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms