Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Traf4Q61382 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Traf4Q61382 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Traf4Q61382 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Traf4Q61382 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Traf4Q61382 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Traf4Q61382 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Traf4Q61382 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.77■□□□□ 0.44
Traf4Q61382 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.77■□□□□ 0.44
Traf4Q61382 Golgb1-201ENSMUST00000023534 498 ntBASIC17.77■□□□□ 0.44
Traf4Q61382 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Traf4Q61382 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Traf4Q61382 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Traf4Q61382 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Traf4Q61382 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Traf4Q61382 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf4Q61382 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.76■□□□□ 0.43
Traf4Q61382 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf4Q61382 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Traf4Q61382 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.76■□□□□ 0.43
Traf4Q61382 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.76■□□□□ 0.43
Traf4Q61382 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.76■□□□□ 0.43
Traf4Q61382 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf4Q61382 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Traf4Q61382 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf4Q61382 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf4Q61382 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf4Q61382 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Traf4Q61382 Gm12821-201ENSMUST00000120022 600 ntBASIC17.75■□□□□ 0.43
Traf4Q61382 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.75■□□□□ 0.43
Traf4Q61382 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Traf4Q61382 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf4Q61382 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf4Q61382 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf4Q61382 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Traf4Q61382 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Traf4Q61382 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf4Q61382 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf4Q61382 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf4Q61382 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Traf4Q61382 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf4Q61382 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf4Q61382 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.73■□□□□ 0.43
Traf4Q61382 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Traf4Q61382 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf4Q61382 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf4Q61382 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf4Q61382 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.73■□□□□ 0.43
Traf4Q61382 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.73■□□□□ 0.43
Traf4Q61382 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf4Q61382 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf4Q61382 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf4Q61382 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf4Q61382 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf4Q61382 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Traf4Q61382 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Traf4Q61382 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf4Q61382 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf4Q61382 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.72■□□□□ 0.43
Traf4Q61382 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.72■□□□□ 0.43
Traf4Q61382 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Traf4Q61382 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf4Q61382 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf4Q61382 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf4Q61382 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf4Q61382 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.71■□□□□ 0.43
Traf4Q61382 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Traf4Q61382 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf4Q61382 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Traf4Q61382 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf4Q61382 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Traf4Q61382 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf4Q61382 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Traf4Q61382 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Traf4Q61382 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf4Q61382 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf4Q61382 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf4Q61382 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf4Q61382 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Traf4Q61382 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf4Q61382 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Traf4Q61382 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Traf4Q61382 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Traf4Q61382 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf4Q61382 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.69■□□□□ 0.42
Traf4Q61382 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf4Q61382 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.69■□□□□ 0.42
Traf4Q61382 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.69■□□□□ 0.42
Traf4Q61382 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.69■□□□□ 0.42
Traf4Q61382 Gm27454-201ENSMUST00000185090 204 ntBASIC17.69■□□□□ 0.42
Traf4Q61382 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Traf4Q61382 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Traf4Q61382 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf4Q61382 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Traf4Q61382 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf4Q61382 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf4Q61382 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.69■□□□□ 0.42
Traf4Q61382 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf4Q61382 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf4Q61382 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms