Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scarb1Q61009 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scarb1Q61009 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
Scarb1Q61009 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Scarb1Q61009 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Scarb1Q61009 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scarb1Q61009 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scarb1Q61009 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scarb1Q61009 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.95■□□□□ 0.3
Scarb1Q61009 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scarb1Q61009 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.95■□□□□ 0.3
Scarb1Q61009 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scarb1Q61009 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Scarb1Q61009 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scarb1Q61009 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.95■□□□□ 0.3
Scarb1Q61009 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scarb1Q61009 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.95■□□□□ 0.3
Scarb1Q61009 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scarb1Q61009 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Scarb1Q61009 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.94■□□□□ 0.3
Scarb1Q61009 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scarb1Q61009 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scarb1Q61009 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scarb1Q61009 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scarb1Q61009 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Scarb1Q61009 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scarb1Q61009 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scarb1Q61009 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scarb1Q61009 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scarb1Q61009 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scarb1Q61009 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scarb1Q61009 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scarb1Q61009 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scarb1Q61009 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scarb1Q61009 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scarb1Q61009 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scarb1Q61009 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Scarb1Q61009 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scarb1Q61009 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scarb1Q61009 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scarb1Q61009 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Scarb1Q61009 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scarb1Q61009 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Scarb1Q61009 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scarb1Q61009 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scarb1Q61009 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.92■□□□□ 0.3
Scarb1Q61009 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Scarb1Q61009 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scarb1Q61009 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scarb1Q61009 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scarb1Q61009 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Scarb1Q61009 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scarb1Q61009 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scarb1Q61009 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scarb1Q61009 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scarb1Q61009 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scarb1Q61009 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scarb1Q61009 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scarb1Q61009 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scarb1Q61009 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scarb1Q61009 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scarb1Q61009 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scarb1Q61009 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scarb1Q61009 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scarb1Q61009 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scarb1Q61009 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scarb1Q61009 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scarb1Q61009 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scarb1Q61009 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.9■□□□□ 0.3
Scarb1Q61009 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scarb1Q61009 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scarb1Q61009 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scarb1Q61009 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scarb1Q61009 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scarb1Q61009 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Scarb1Q61009 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scarb1Q61009 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scarb1Q61009 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scarb1Q61009 Gm27502-201ENSMUST00000183495 199 ntBASIC16.89■□□□□ 0.29
Scarb1Q61009 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scarb1Q61009 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scarb1Q61009 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.89■□□□□ 0.29
Scarb1Q61009 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.89■□□□□ 0.29
Scarb1Q61009 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scarb1Q61009 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.88■□□□□ 0.29
Scarb1Q61009 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scarb1Q61009 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scarb1Q61009 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms