Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a4Q60857 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a4Q60857 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a4Q60857 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a4Q60857 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a4Q60857 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Slc6a4Q60857 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a4Q60857 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a4Q60857 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a4Q60857 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a4Q60857 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a4Q60857 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a4Q60857 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a4Q60857 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a4Q60857 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a4Q60857 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a4Q60857 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a4Q60857 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a4Q60857 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Slc6a4Q60857 Gm8493-201ENSMUST00000196881 489 ntBASIC20.78■□□□□ 0.92
Slc6a4Q60857 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
Slc6a4Q60857 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a4Q60857 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Slc6a4Q60857 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a4Q60857 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a4Q60857 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a4Q60857 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a4Q60857 Gm43017-201ENSMUST00000198296 752 ntBASIC20.77■□□□□ 0.92
Slc6a4Q60857 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a4Q60857 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a4Q60857 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a4Q60857 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.77■□□□□ 0.92
Slc6a4Q60857 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.76■□□□□ 0.91
Slc6a4Q60857 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a4Q60857 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.76■□□□□ 0.91
Slc6a4Q60857 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a4Q60857 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.76■□□□□ 0.91
Slc6a4Q60857 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.76■□□□□ 0.91
Slc6a4Q60857 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Gm43173-201ENSMUST00000202246 593 ntBASIC20.75■□□□□ 0.91
Slc6a4Q60857 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.75■□□□□ 0.91
Slc6a4Q60857 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Slc6a4Q60857 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a4Q60857 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Slc6a4Q60857 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a4Q60857 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a4Q60857 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a4Q60857 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a4Q60857 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a4Q60857 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a4Q60857 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a4Q60857 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a4Q60857 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Slc6a4Q60857 Spcs1-204ENSMUST00000226782 949 ntBASIC20.72■□□□□ 0.91
Slc6a4Q60857 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a4Q60857 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a4Q60857 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a4Q60857 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a4Q60857 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a4Q60857 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms