Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim38Q5SZ99 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.98■□□□□ 0.95
Trim38Q5SZ99 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim38Q5SZ99 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim38Q5SZ99 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim38Q5SZ99 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim38Q5SZ99 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim38Q5SZ99 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim38Q5SZ99 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim38Q5SZ99 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim38Q5SZ99 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim38Q5SZ99 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim38Q5SZ99 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim38Q5SZ99 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim38Q5SZ99 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim38Q5SZ99 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Trim38Q5SZ99 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim38Q5SZ99 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trim38Q5SZ99 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim38Q5SZ99 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.97■□□□□ 0.95
Trim38Q5SZ99 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim38Q5SZ99 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim38Q5SZ99 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trim38Q5SZ99 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trim38Q5SZ99 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim38Q5SZ99 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.96■□□□□ 0.95
Trim38Q5SZ99 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim38Q5SZ99 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim38Q5SZ99 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim38Q5SZ99 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.95■□□□□ 0.95
Trim38Q5SZ99 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim38Q5SZ99 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim38Q5SZ99 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.95■□□□□ 0.94
Trim38Q5SZ99 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim38Q5SZ99 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim38Q5SZ99 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim38Q5SZ99 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim38Q5SZ99 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim38Q5SZ99 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim38Q5SZ99 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim38Q5SZ99 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim38Q5SZ99 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim38Q5SZ99 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim38Q5SZ99 Etf1-202ENSMUST00000180351 108 ntBASIC20.94■□□□□ 0.94
Trim38Q5SZ99 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim38Q5SZ99 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim38Q5SZ99 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim38Q5SZ99 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim38Q5SZ99 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim38Q5SZ99 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim38Q5SZ99 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Trim38Q5SZ99 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim38Q5SZ99 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim38Q5SZ99 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim38Q5SZ99 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim38Q5SZ99 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim38Q5SZ99 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim38Q5SZ99 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Trim38Q5SZ99 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim38Q5SZ99 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim38Q5SZ99 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim38Q5SZ99 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim38Q5SZ99 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim38Q5SZ99 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim38Q5SZ99 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trim38Q5SZ99 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim38Q5SZ99 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.9■□□□□ 0.94
Trim38Q5SZ99 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.9■□□□□ 0.94
Trim38Q5SZ99 Gm9870-201ENSMUST00000063874 645 ntBASIC20.9■□□□□ 0.94
Trim38Q5SZ99 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim38Q5SZ99 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim38Q5SZ99 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim38Q5SZ99 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Trim38Q5SZ99 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim38Q5SZ99 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim38Q5SZ99 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim38Q5SZ99 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.88■□□□□ 0.93
Trim38Q5SZ99 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim38Q5SZ99 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim38Q5SZ99 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim38Q5SZ99 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim38Q5SZ99 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim38Q5SZ99 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim38Q5SZ99 Gm9959-201ENSMUST00000068277 390 ntBASIC20.88■□□□□ 0.93
Trim38Q5SZ99 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim38Q5SZ99 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim38Q5SZ99 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim38Q5SZ99 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim38Q5SZ99 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim38Q5SZ99 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.87■□□□□ 0.93
Trim38Q5SZ99 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim38Q5SZ99 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim38Q5SZ99 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
Trim38Q5SZ99 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim38Q5SZ99 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim38Q5SZ99 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim38Q5SZ99 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim38Q5SZ99 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Trim38Q5SZ99 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Trim38Q5SZ99 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms