Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav2Q5R1I9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav2Q5R1I9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav2Q5R1I9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav2Q5R1I9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav2Q5R1I9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav2Q5R1I9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav2Q5R1I9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.11■□□□□ 0.17
Trav2Q5R1I9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Trav2Q5R1I9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav2Q5R1I9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav2Q5R1I9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav2Q5R1I9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav2Q5R1I9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav2Q5R1I9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav2Q5R1I9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav2Q5R1I9 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.1■□□□□ 0.17
Trav2Q5R1I9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav2Q5R1I9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trav2Q5R1I9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav2Q5R1I9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav2Q5R1I9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.1■□□□□ 0.17
Trav2Q5R1I9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav2Q5R1I9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav2Q5R1I9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav2Q5R1I9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav2Q5R1I9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav2Q5R1I9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav2Q5R1I9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav2Q5R1I9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav2Q5R1I9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav2Q5R1I9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav2Q5R1I9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav2Q5R1I9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav2Q5R1I9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav2Q5R1I9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav2Q5R1I9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav2Q5R1I9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav2Q5R1I9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav2Q5R1I9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav2Q5R1I9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav2Q5R1I9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trav2Q5R1I9 Mir7075-201ENSMUST00000184187 82 ntBASIC16.08■□□□□ 0.16
Trav2Q5R1I9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav2Q5R1I9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav2Q5R1I9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Trav2Q5R1I9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav2Q5R1I9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav2Q5R1I9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav2Q5R1I9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav2Q5R1I9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav2Q5R1I9 Serp2-204ENSMUST00000228055 705 ntBASIC16.07■□□□□ 0.16
Trav2Q5R1I9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav2Q5R1I9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav2Q5R1I9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav2Q5R1I9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav2Q5R1I9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav2Q5R1I9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav2Q5R1I9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav2Q5R1I9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav2Q5R1I9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav2Q5R1I9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav2Q5R1I9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav2Q5R1I9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav2Q5R1I9 Gm6139-201ENSMUST00000079261 882 ntBASIC16.05■□□□□ 0.16
Trav2Q5R1I9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav2Q5R1I9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav2Q5R1I9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trav2Q5R1I9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav2Q5R1I9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav2Q5R1I9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav2Q5R1I9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
Trav2Q5R1I9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav2Q5R1I9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav2Q5R1I9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Trav2Q5R1I9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav2Q5R1I9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav2Q5R1I9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav2Q5R1I9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.04■□□□□ 0.16
Trav2Q5R1I9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav2Q5R1I9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav2Q5R1I9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav2Q5R1I9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav2Q5R1I9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav2Q5R1I9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav2Q5R1I9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.03■□□□□ 0.16
Trav2Q5R1I9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms