Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clhc1Q5M6W3 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.42■□□□□ 0.7
Clhc1Q5M6W3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clhc1Q5M6W3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clhc1Q5M6W3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clhc1Q5M6W3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clhc1Q5M6W3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.42■□□□□ 0.7
Clhc1Q5M6W3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clhc1Q5M6W3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clhc1Q5M6W3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clhc1Q5M6W3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clhc1Q5M6W3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clhc1Q5M6W3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clhc1Q5M6W3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clhc1Q5M6W3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clhc1Q5M6W3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clhc1Q5M6W3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Clhc1Q5M6W3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clhc1Q5M6W3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clhc1Q5M6W3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clhc1Q5M6W3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clhc1Q5M6W3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clhc1Q5M6W3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.4■□□□□ 0.7
Clhc1Q5M6W3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.4■□□□□ 0.7
Clhc1Q5M6W3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clhc1Q5M6W3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clhc1Q5M6W3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clhc1Q5M6W3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clhc1Q5M6W3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Clhc1Q5M6W3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.39■□□□□ 0.7
Clhc1Q5M6W3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clhc1Q5M6W3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clhc1Q5M6W3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Clhc1Q5M6W3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Clhc1Q5M6W3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clhc1Q5M6W3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clhc1Q5M6W3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clhc1Q5M6W3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clhc1Q5M6W3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clhc1Q5M6W3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.39■□□□□ 0.69
Clhc1Q5M6W3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Clhc1Q5M6W3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Clhc1Q5M6W3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.38■□□□□ 0.69
Clhc1Q5M6W3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clhc1Q5M6W3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clhc1Q5M6W3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clhc1Q5M6W3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clhc1Q5M6W3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clhc1Q5M6W3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clhc1Q5M6W3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clhc1Q5M6W3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clhc1Q5M6W3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clhc1Q5M6W3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.36■□□□□ 0.69
Clhc1Q5M6W3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clhc1Q5M6W3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.36■□□□□ 0.69
Clhc1Q5M6W3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.36■□□□□ 0.69
Clhc1Q5M6W3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clhc1Q5M6W3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clhc1Q5M6W3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clhc1Q5M6W3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clhc1Q5M6W3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clhc1Q5M6W3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clhc1Q5M6W3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.35■□□□□ 0.69
Clhc1Q5M6W3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clhc1Q5M6W3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.35■□□□□ 0.69
Clhc1Q5M6W3 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.35■□□□□ 0.69
Clhc1Q5M6W3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clhc1Q5M6W3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clhc1Q5M6W3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clhc1Q5M6W3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clhc1Q5M6W3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clhc1Q5M6W3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clhc1Q5M6W3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clhc1Q5M6W3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clhc1Q5M6W3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clhc1Q5M6W3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clhc1Q5M6W3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clhc1Q5M6W3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Clhc1Q5M6W3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clhc1Q5M6W3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms